RNA–Protein interactions for RNA: ENST00000594828.7

LSM4-204, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-204ENST00000594828 SH2D7A6NKC9 451 aaPredicted RBP18.71■□□□□ 0.59
LSM4-204ENST00000594828 FAM90A9PA6NNJ1 464 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 FAM90A12PA8MX19 464 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 FAM90A5PA8MXJ8 464 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 MYL12BO14950 172 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 FAM90A15PP0C7V4 464 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 FAM90A13PP0C7W8 464 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 FAM90A14PP0C7W9 464 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 FAM90A24PP0C7X0 464 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 CELP19835 753 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 RAB7AP51149 207 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 WNT4P56705 351 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 BEAN1Q3B7T3 259 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 SAMD5Q5TGI4 173 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 GLIPR1L1Q6UWM5 242 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 DRAM1Q8N682 238 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 OR10X1Q8NGY0 326 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 OR56B4Q8NH76 319 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 CCDC107Q8WV48 283 aa18.71■□□□□ 0.59
LSM4-204ENST00000594828 MRPS28Q9Y2Q9 187 aaKnown RBP18.71■□□□□ 0.59
LSM4-204ENST00000594828 MAS1P04201 325 aa18.7■□□□□ 0.58
LSM4-204ENST00000594828 SNRNP70P08621 437 aaKnown RBP18.7■□□□□ 0.58
LSM4-204ENST00000594828 DIAPH2-AS1Q14236 149 aa18.7■□□□□ 0.58
LSM4-204ENST00000594828 C9orf152Q5JTZ5 239 aa18.7■□□□□ 0.58
LSM4-204ENST00000594828 CDH26Q8IXH8 852 aa18.7■□□□□ 0.58
LSM4-204ENST00000594828 ARL11Q969Q4 196 aa18.7■□□□□ 0.58
LSM4-204ENST00000594828 MRPS24Q96EL2 167 aaKnown RBP18.7■□□□□ 0.58
LSM4-204ENST00000594828 DERL3Q96Q80 235 aa18.7■□□□□ 0.58
LSM4-204ENST00000594828 SPACA1Q9HBV2 294 aa18.7■□□□□ 0.58
LSM4-204ENST00000594828 A0A1W2PPE3 182 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 A0A1W2PPI3 338 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 MCRIP1C9JLW8 97 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 C15orf65H3BRN8 121 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 MT-ND4P03905 459 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 CD1AP06126 327 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 HES1Q14469 280 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 AWAT2Q6E213 333 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 OR8H3Q8N146 312 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 NANOGP1Q8N7R0 232 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 VCXQ9H320 206 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 ERGIC3Q9Y282 383 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 MOB4Q9Y3A3 225 aa18.69■□□□□ 0.58
LSM4-204ENST00000594828 PLXNB1O43157 2135 aa18.68■□□□□ 0.58
LSM4-204ENST00000594828 A0A1W2PRX2 142 aa18.68■□□□□ 0.58
LSM4-204ENST00000594828 ORC5O43913 435 aa18.68■□□□□ 0.58
LSM4-204ENST00000594828 DOC2BQ14184 412 aa18.68■□□□□ 0.58
LSM4-204ENST00000594828 KPRPQ5T749 579 aaPredicted RBP18.68■□□□□ 0.58
LSM4-204ENST00000594828 ZNF497Q6ZNH5 498 aa18.68■□□□□ 0.58
LSM4-204ENST00000594828 OR52M1Q8NGK5 317 aa18.68■□□□□ 0.58
LSM4-204ENST00000594828 TFAP2CQ92754 450 aa18.68■□□□□ 0.58
LSM4-204ENST00000594828 FKBP14Q9NWM8 211 aa18.68■□□□□ 0.58
LSM4-204ENST00000594828 TCRBV4S1A1TA0A5B7 111 aa18.67■□□□□ 0.58
LSM4-204ENST00000594828 ANKRD65E5RJM6 399 aa18.67■□□□□ 0.58
LSM4-204ENST00000594828 AIPO00170 330 aa18.67■□□□□ 0.58
LSM4-204ENST00000594828 SDCBPO00560 298 aaPredicted RBP18.67■□□□□ 0.58
LSM4-204ENST00000594828 PIN1P1O15428 100 aa18.67■□□□□ 0.58
LSM4-204ENST00000594828 TMEM11P17152 192 aa18.67■□□□□ 0.58
LSM4-204ENST00000594828 TCTEX1D4Q5JR98 221 aa18.67■□□□□ 0.58
LSM4-204ENST00000594828 UBALD1Q8TB05 177 aa18.67■□□□□ 0.58
LSM4-204ENST00000594828 THRSPQ92748 146 aa18.67■□□□□ 0.58
LSM4-204ENST00000594828 RCC2Q9P258 522 aaKnown RBP18.67■□□□□ 0.58
LSM4-204ENST00000594828 GAPDHP04406 335 aaKnown RBP18.66■□□□□ 0.58
LSM4-204ENST00000594828 MAPK3P27361 379 aaPredicted RBP18.66■□□□□ 0.58
LSM4-204ENST00000594828 HNF4GQ14541 408 aa18.66■□□□□ 0.58
LSM4-204ENST00000594828 OXLD1Q5BKU9 147 aa18.66■□□□□ 0.58
LSM4-204ENST00000594828 RAB12Q6IQ22 244 aa18.66■□□□□ 0.58
LSM4-204ENST00000594828 OR4X2Q8NGF9 303 aa18.66■□□□□ 0.58
LSM4-204ENST00000594828 SELENOIQ9C0D9 397 aa18.66■□□□□ 0.58
LSM4-204ENST00000594828 BANF2Q9H503 90 aa18.66■□□□□ 0.58
LSM4-204ENST00000594828 GFOD1Q9NXC2 390 aa18.66■□□□□ 0.58
LSM4-204ENST00000594828 ETAA1Q9NY74 926 aa18.66■□□□□ 0.58
LSM4-204ENST00000594828 TRAPPC2LQ9UL33 140 aa18.66■□□□□ 0.58
LSM4-204ENST00000594828 TSSC4Q9Y5U2 329 aaPredicted RBP18.66■□□□□ 0.58
LSM4-204ENST00000594828 HSD17B6O14756 317 aa18.65■□□□□ 0.58
LSM4-204ENST00000594828 MGMTP16455 207 aa18.65■□□□□ 0.58
LSM4-204ENST00000594828 LOXL3P58215 753 aa18.65■□□□□ 0.58
LSM4-204ENST00000594828 ZNF816Q0VGE8 651 aaPredicted RBP18.65■□□□□ 0.58
LSM4-204ENST00000594828 SYT6Q5T7P8 510 aaPredicted RBP18.65■□□□□ 0.58
LSM4-204ENST00000594828 LYPD6Q86Y78 171 aa18.65■□□□□ 0.58
LSM4-204ENST00000594828 LINC00311Q8N616 119 aa18.65■□□□□ 0.58
LSM4-204ENST00000594828 NKAIN3Q8N8D7 197 aa18.65■□□□□ 0.58
LSM4-204ENST00000594828 MYDGFQ969H8 173 aa18.65■□□□□ 0.58
LSM4-204ENST00000594828 DCLRE1BQ9H816 532 aa18.65■□□□□ 0.58
LSM4-204ENST00000594828 PEX16Q9Y5Y5 336 aa18.65■□□□□ 0.58
LSM4-204ENST00000594828 IGHV3-43A0A0B4J1X8 118 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 CCRL2O00421 344 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 CRTAPO75718 401 aaPredicted RBP18.64■□□□□ 0.57
LSM4-204ENST00000594828 IGKV1D-33P01593 117 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 IGKV1-33P01594 117 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 CDK1P06493 297 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 IGHV3-43DP0DP04 118 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 PF4V1P10720 104 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 C10orf99Q6UWK7 81 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 MOB3BQ86TA1 216 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 C8orf31Q8N9H6 132 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 TMEM104Q8NE00 496 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 OR4K15Q8NH41 348 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 UQCC2Q9BRT2 126 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 RAB9BQ9NP90 201 aa18.64■□□□□ 0.57
LSM4-204ENST00000594828 IGHV1-3A0A0C4DH29 117 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms