RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 MINOS1Q5TGZ0 78 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 C12orf54Q6X4T0 127 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 DYNAPQ8N1N2 210 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 OR4P4Q8NGL7 312 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 OR5R1Q8NH85 324 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 CCDC107Q8WV48 283 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 TAF15Q92804 592 aaKnown RBP eCLIP11.79□□□□□ -0.52
VRK3-206ENST00000594090 MALSU1Q96EH3 234 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 TXNL4BQ9NX01 149 aaKnown RBP11.79□□□□□ -0.52
VRK3-206ENST00000594090 MINOS1-NBL1R4GNA1 71 aa11.79□□□□□ -0.52
VRK3-206ENST00000594090 A0A0A6YYD4 124 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 IGLV1-47P01700 117 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 CRYBA1P05813 215 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 RAB3BP20337 219 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 CFPP27918 469 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 RANBP1P43487 201 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 SSX2Q16385 188 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 AANATQ16613 207 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 AWAT1Q58HT5 328 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 NKAPLQ5M9Q1 402 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 UTF1Q5T230 341 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 HES5Q5TA89 166 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 GDPGP1Q6ZNW5 385 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 GAPTQ8N292 157 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 OR51D1Q8NGF3 324 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 NDNFQ8TB73 568 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 ZNF596Q8TC21 504 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 FAM3DQ96BQ1 224 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 NICN1Q9BSH3 213 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 LPAR5Q9H1C0 372 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 STEAP1Q9UHE8 339 aa11.78□□□□□ -0.52
VRK3-206ENST00000594090 UBE2QL1A1L167 161 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 VGLL3A8MV65 326 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 C15orf65H3BRN8 121 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 CA11O75493 328 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 GZMHP20718 246 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 HTR1DP28221 377 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 RELBQ01201 579 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 FOXL1Q12952 345 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 FAM189A2Q15884 450 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 LTC4SQ16873 150 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 PLA1AQ53H76 456 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 OR10A7Q8NGE5 316 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 OR4K15Q8NH41 348 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 RFESDQ8TAC1 157 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 ARL11Q969Q4 196 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 NEDD4LQ96PU5 975 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 SULT4A1Q9BR01 284 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 URM1Q9BTM9 101 aaKnown RBP11.77□□□□□ -0.52
VRK3-206ENST00000594090 OR51E2Q9H255 320 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 ZNF696Q9H7X3 374 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 C1RLQ9NZP8 487 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 FBLN5Q9UBX5 448 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 TRAPPC2LQ9UL33 140 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 SSR3Q9UNL2 185 aa11.77□□□□□ -0.52
VRK3-206ENST00000594090 A0A087WXM4 84 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 IFITM5A6NNB3 132 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 TOR1AO14656 332 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 LDLRAD4O15165 306 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 ORC5O43913 435 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 CD36P16671 472 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 HLA-DRB5Q30154 266 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 C2orf76Q3KRA6 126 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 C6orf201Q7Z4U5 140 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 NR2C2APQ86WQ0 139 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 UBALD1Q8TB05 177 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 MRPL30Q8TCC3 161 aaKnown RBP11.77□□□□□ -0.53
VRK3-206ENST00000594090 PIFOQ8TCI5 191 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 HILPDAQ9Y5L2 63 aa11.77□□□□□ -0.53
VRK3-206ENST00000594090 TMEM272A0A1B0GTI8 110 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 SMIM30A4D0T7 59 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 C12orf77C9JDV5 145 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 NDUFA7O95182 113 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 GADD45AP24522 165 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 BLVRBP30043 206 aaPredicted RBP11.76□□□□□ -0.53
VRK3-206ENST00000594090 PRRX1P54821 245 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 RAG2P55895 527 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 LY6EQ16553 131 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 C6orf183Q5T699 404 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 DHRS7BQ6IAN0 325 aaPredicted RBP11.76□□□□□ -0.53
VRK3-206ENST00000594090 FAM89BQ8N5H3 189 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 OR9G1Q8NH87 305 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 CHCHD6Q9BRQ6 235 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 FAAP24Q9BTP7 215 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 MMP28Q9H239 520 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 VCX3AQ9NNX9 186 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 ABCB10Q9NRK6 738 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 MBNL3Q9NUK0 354 aaKnown RBP11.76□□□□□ -0.53
VRK3-206ENST00000594090 DPM3Q9P2X0 92 aa11.76□□□□□ -0.53
VRK3-206ENST00000594090 TRIM64CA6NLI5 447 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 LEUTXA8MZ59 168 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 BUB1B-PAK6H3BSN5 160 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 J3QR06 171 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 F2RL2O00254 374 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 SDCBPO00560 298 aaPredicted RBP11.75□□□□□ -0.53
VRK3-206ENST00000594090 SOCS1O15524 211 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 IGHV3-7P01780 117 aa11.75□□□□□ -0.53
VRK3-206ENST00000594090 JUNBP17275 347 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms