RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 BPIFB6Q8NFQ5 453 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 OR10K1Q8NGX5 313 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 OR56B4Q8NH76 319 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 OR9G1Q8NH87 305 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 CHPT1Q8WUD6 406 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 PPIL3Q9H2H8 161 aaKnown RBP11.68□□□□□ -0.54
PNKP-202ENST00000593706 IFT22Q9H7X7 185 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 PAK1IP1Q9NWT1 392 aaPredicted RBP11.68□□□□□ -0.54
PNKP-202ENST00000593706 CHCHD3Q9NX63 227 aaKnown RBP11.68□□□□□ -0.54
PNKP-202ENST00000593706 OR6C3Q9NZP0 311 aa11.68□□□□□ -0.54
PNKP-202ENST00000593706 LSM2Q9Y333 95 aaKnown RBP11.68□□□□□ -0.54
PNKP-202ENST00000593706 A0A087X0M5 115 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 A0A1B0GX30 115 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 SERPINE3A8MV23 424 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 HSPB6O14558 160 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 DEGS1O15121 323 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 CDRT1O95170 752 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 CDK1P06493 297 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 CGB3P0DN86 165 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 CGB7P0DN87 165 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 TMEM11P17152 192 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 PPP3R1P63098 170 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 RIPK1Q13546 671 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 UNQ9370/PRO34162Q6UXP9 181 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 OR2W3Q7Z3T1 314 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 KIRREL1Q96J84 757 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 NOL4LQ96MY1 436 aaPredicted RBP11.67□□□□□ -0.54
PNKP-202ENST00000593706 DERL3Q96Q80 235 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 OR14A2Q96R54 314 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 LINC00574Q9H8X3 128 aa11.67□□□□□ -0.54
PNKP-202ENST00000593706 LY6LH3BQJ8 138 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 MAGEB3O15480 346 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 BDKRB2P30411 391 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 SLC6A1P30531 599 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 ZNF93P35789 620 aaPredicted RBP11.66□□□□□ -0.54
PNKP-202ENST00000593706 RBM11P57052 281 aaKnown RBP11.66□□□□□ -0.54
PNKP-202ENST00000593706 RAB25P57735 213 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 SLC35B1P78383 322 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 MADCAM1Q13477 382 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 IRF3Q14653 427 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 C17orf58Q2M2W7 97 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 C6orf141Q5SZD1 244 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 UTF1Q5T230 341 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 SATL1Q86VE3 508 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 STX19Q8N4C7 294 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 GPER1Q99527 375 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 ZNF184Q99676 751 aaPredicted RBP11.66□□□□□ -0.54
PNKP-202ENST00000593706 FAM192AQ9GZU8 254 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 NCOR1P1Q9H4R4 102 aa11.66□□□□□ -0.54
PNKP-202ENST00000593706 ZMAT5Q9UDW3 170 aaKnown RBP11.66□□□□□ -0.54
PNKP-202ENST00000593706 MEIKINA0A087WXM9 373 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 KBTBD11-OT1A0A1B0GTJ5 212 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 PNMA8CA0A1B0GUJ8 204 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 MYL12BO14950 172 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 IGHV3-7P01780 117 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 CELP19835 753 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 GNG10P50151 68 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 GP2P55259 537 aaKnown RBP11.65□□□□□ -0.54
PNKP-202ENST00000593706 RSU1Q15404 277 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 LTC4SQ16873 150 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 RSBN1Q5VWQ0 802 aaPredicted RBP11.65□□□□□ -0.54
PNKP-202ENST00000593706 C18orf65Q6ZTR6 163 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 SLC35E3Q7Z769 313 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 FOXRED2Q8IWF2 684 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 DRAM1Q8N682 238 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 C5orf56Q8N8D9 126 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 ZNF565Q8N9K5 539 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 PLPPR1Q8TBJ4 325 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 LEAP2Q969E1 77 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 ANKRD60Q9BZ19 345 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 CALYQ9NYX4 217 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 LINC00527Q9UJ94 153 aa11.65□□□□□ -0.54
PNKP-202ENST00000593706 A0A1W2PP11 408 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 A0A1W2PPI3 338 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 J3QR06 171 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 FGF16O43320 207 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 MYF6P23409 242 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 MYCNOSP40205 109 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 RAB7AP51149 207 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 DGCR2P98153 550 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 HNF4GQ14541 408 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 PAN3Q58A45 887 aaKnown RBP11.64□□□□□ -0.55
PNKP-202ENST00000593706 THNSL2Q86YJ6 484 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 COMMD1Q8N668 190 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 OR13A1Q8NGR1 328 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 OR10X1Q8NGY0 326 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 NR1H4Q96RI1 486 aaPredicted RBP11.64□□□□□ -0.55
PNKP-202ENST00000593706 DUSP21Q9H596 190 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 ZFP57Q9NU63 452 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 CKLFQ9UBR5 152 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 KIF25Q9UIL4 384 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 ST3GAL6Q9Y274 331 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 SORL1Q92673 2214 aa11.64□□□□□ -0.55
PNKP-202ENST00000593706 A0A1W2PPK0 400 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A18PA6NE21 464 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A16PA6NEW6 464 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A20PA6NIJ5 464 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A9PA6NNJ1 464 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A12PA8MX19 464 aa11.63□□□□□ -0.55
PNKP-202ENST00000593706 FAM90A5PA8MXJ8 464 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms