RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TAS2R4Q9NYW5 299 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 ZMAT5Q9UDW3 170 aaKnown RBP12.82□□□□□ -0.36
LIG1-205ENST00000593425 ST3GAL6Q9Y274 331 aa12.82□□□□□ -0.36
LIG1-205ENST00000593425 IGHV3-43A0A0B4J1X8 118 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 ZNF736B4DX44 427 aaPredicted RBP12.81□□□□□ -0.36
LIG1-205ENST00000593425 C15orf65H3BRN8 121 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 CDRT1O95170 752 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 NHLRC4P0CG21 123 aaPredicted RBP12.81□□□□□ -0.36
LIG1-205ENST00000593425 IGHV3-43DP0DP04 118 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 GP2P55259 537 aaKnown RBP12.81□□□□□ -0.36
LIG1-205ENST00000593425 CFHR3Q02985 330 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 GPR50Q13585 617 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 KIR2DS1Q14954 304 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 CXorf66Q5JRM2 361 aaPredicted RBP12.81□□□□□ -0.36
LIG1-205ENST00000593425 C9orf66Q5T8R8 295 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 LINC00311Q8N616 119 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 RNF152Q8N8N0 203 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 TMEM104Q8NE00 496 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 OR5M8Q8NGP6 311 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 OR2T10Q8NGZ9 312 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 ST6GALNAC6Q969X2 333 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 CPNE2Q96FN4 548 aaPredicted RBP12.81□□□□□ -0.36
LIG1-205ENST00000593425 MRPL48Q96GC5 212 aaKnown RBP12.81□□□□□ -0.36
LIG1-205ENST00000593425 JAM3Q9BX67 310 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 AMBNQ9NP70 447 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 PLSCR3Q9NRY6 295 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 FAM118AQ9NWS6 357 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 ERVK13-1Q9NX77 482 aa12.81□□□□□ -0.36
LIG1-205ENST00000593425 SNTNA6NMZ2 147 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 SDCBPO00560 298 aaPredicted RBP12.8□□□□□ -0.36
LIG1-205ENST00000593425 MAGEB3O15480 346 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 MPZL2O60487 215 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 OR7C1O76099 320 aaPredicted RBP12.8□□□□□ -0.36
LIG1-205ENST00000593425 CDX1P47902 265 aaPredicted RBP12.8□□□□□ -0.36
LIG1-205ENST00000593425 GTF2A1P52655 376 aaPredicted RBP12.8□□□□□ -0.36
LIG1-205ENST00000593425 RBM11P57052 281 aaKnown RBP12.8□□□□□ -0.36
LIG1-205ENST00000593425 FOXE3Q13461 319 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 RTN4IP1Q8WWV3 396 aaPredicted RBP12.8□□□□□ -0.36
LIG1-205ENST00000593425 PYDC1Q8WXC3 89 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 ARL11Q969Q4 196 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 S1PR3Q99500 378 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 ASCL2Q99929 193 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 HSPB9Q9BQS6 159 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 IFT22Q9H7X7 185 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 GFOD1Q9NXC2 390 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 SCOCQ9UIL1 159 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 ORC6Q9Y5N6 252 aa12.8□□□□□ -0.36
LIG1-205ENST00000593425 TENM3Q9P273 2699 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 TMEM30CPA0ZSE6 113 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 GEMIN2O14893 280 aaKnown RBP12.79□□□□□ -0.36
LIG1-205ENST00000593425 SLC31A2O15432 143 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 RPSAP08865 295 aaKnown RBP12.79□□□□□ -0.36
LIG1-205ENST00000593425 ECI1P42126 302 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 MRPL28Q13084 256 aaKnown RBP12.79□□□□□ -0.36
LIG1-205ENST00000593425 NHLRC3Q5JS37 347 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 XAF1Q6GPH4 301 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 CCDC107Q8WV48 283 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 GON7Q9BXV9 100 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 ING4Q9UNL4 249 aa12.79□□□□□ -0.36
LIG1-205ENST00000593425 A0A1W2PP11 408 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 SEC14L6B5MCN3 397 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 MOSP00540 346 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 ELANEP08246 267 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 GZMHP20718 246 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 SERPINA2P20848 420 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 CD1BP29016 333 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 RASSF2P50749 326 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 ALDH3A2P51648 485 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 GBX2P52951 348 aaPredicted RBP12.78□□□□□ -0.36
LIG1-205ENST00000593425 F2RL1P55085 397 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 FHL3Q13643 280 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 FAM71E2Q8N5Q1 922 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 C8orf31Q8N9H6 132 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 OR52I1Q8NGK6 324 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 OR52N1Q8NH53 320 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 MYCBPQ99417 103 aaPredicted RBP12.78□□□□□ -0.36
LIG1-205ENST00000593425 RASL11BQ9BPW5 248 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 IL36GQ9NZH8 169 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 GMPPBQ9Y5P6 360 aa12.78□□□□□ -0.36
LIG1-205ENST00000593425 HUWE1Q7Z6Z7 4374 aaKnown RBP12.78□□□□□ -0.36
LIG1-205ENST00000593425 H3BNX3 289 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 RRP9O43818 475 aaKnown RBP12.77□□□□□ -0.37
LIG1-205ENST00000593425 FADS2O95864 444 aaKnown RBP12.77□□□□□ -0.37
LIG1-205ENST00000593425 IGHG4P01861 327 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 IL3RAP26951 378 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 ATAD3CQ5T2N8 411 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 DDI2Q5TDH0 399 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 ZNF439Q8NDP4 499 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 C4orf3Q8WVX3 66 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 TMEM106AQ96A25 262 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 ORAI1Q96D31 301 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 METTL9Q9H1A3 318 aa12.77□□□□□ -0.37
LIG1-205ENST00000593425 ORC5O43913 435 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 CIB2O75838 187 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 MT-ND4P03905 459 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 CSTBP04080 98 aaKnown RBP12.76□□□□□ -0.37
LIG1-205ENST00000593425 LIMS3P0CW19 117 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 LIMS4P0CW20 117 aa12.76□□□□□ -0.37
LIG1-205ENST00000593425 VDAC1P21796 283 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms