RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PPP1R35Q8TAP8 253 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 MED30Q96HR3 178 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 DIRAS2Q96HU8 199 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 DMRTB1Q96MA1 342 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 WDFY2Q96P53 400 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 TMPRSS13Q9BYE2 586 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 FAM234AQ9H0X4 552 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 MMP27Q9H306 513 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 OCEL1Q9H607 264 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 C7orf69Q9H7B7 122 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 SEBOXQ9HB31 216 aaPredicted RBP7.92□□□□□ -1.14
DDX39A-220ENST00000593008 CHMP1AQ9HD42 196 aaPredicted RBP7.92□□□□□ -1.14
DDX39A-220ENST00000593008 ZNRD1Q9P1U0 126 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 ONECUT1Q9UBC0 465 aa7.92□□□□□ -1.14
DDX39A-220ENST00000593008 IGHV3-43A0A0B4J1X8 118 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 IGHV2-70DA0A0C4DH43 119 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 A0A1W2PQ09 198 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 C12orf77C9JDV5 145 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 LANCL1O43813 399 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 IGHV3-7P01780 117 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 CSN2P05814 226 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 FCGR3AP08637 254 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 IGHV3-43DP0DP04 118 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 GATA3P23771 443 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 ARF6P62330 175 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 ARFRP1Q13795 201 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 GNMTQ14749 295 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 C17orf58Q2M2W7 97 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 HACD4Q5VWC8 232 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 TRAPPC6BQ86SZ2 158 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 GAPTQ8N292 157 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 PRR18Q8N4B5 295 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 C11orf42Q8N5U0 333 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 Q8N7P7 452 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 LY6G5BQ8NDX9 201 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 OR52I2Q8NH67 350 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 OR1L1Q8NH94 360 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 RFESDQ8TAC1 157 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 RAB40AQ8WXH6 277 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 LEAP2Q969E1 77 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 S100A16Q96FQ6 103 aaKnown RBP7.91□□□□□ -1.14
DDX39A-220ENST00000593008 CMSS1Q9BQ75 279 aaKnown RBP7.91□□□□□ -1.14
DDX39A-220ENST00000593008 SOSTQ9BQB4 213 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 NUDT16L1Q9BRJ7 211 aaKnown RBP7.91□□□□□ -1.14
DDX39A-220ENST00000593008 PARP12Q9H0J9 701 aaKnown RBP7.91□□□□□ -1.14
DDX39A-220ENST00000593008 SPACA1Q9HBV2 294 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 AKIP1Q9NQ31 210 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 C12orf4Q9NQ89 552 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 SIRT7Q9NRC8 400 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 OPN4Q9UHM6 478 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 HSF4Q9ULV5 492 aa7.91□□□□□ -1.14
DDX39A-220ENST00000593008 SOX21Q9Y651 276 aaPredicted RBP7.91□□□□□ -1.14
DDX39A-220ENST00000593008 DNHD1Q96M86 4753 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 DSCAML1Q8TD84 2053 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 PPIAL4CA0A0B4J2A2 164 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 IGKV1-6A0A0C4DH72 117 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 A0A1W2PPH5 198 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 FUOMA2VDF0 154 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 C15orf65H3BRN8 121 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 TMEM127O75204 238 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 ECDO95905 644 aaPredicted RBP7.9□□□□□ -1.14
DDX39A-220ENST00000593008 LIPFP07098 398 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 PPIAL4GP0DN37 164 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 COX7A1P24310 79 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 GNG2P59768 71 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 IL18Q14116 193 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 HERPUD1Q15011 391 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 SLC35E4Q6ICL7 350 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 OR52W1Q6IF63 320 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 ZNF880Q6PDB4 577 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 FAM131AQ6UXB0 335 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 OR5D13Q8NGL4 314 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 C22orf15Q8WYQ4 148 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 SNAPC3Q92966 411 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 RBMXL1Q96E39 390 aaKnown RBP7.9□□□□□ -1.14
DDX39A-220ENST00000593008 TBX15Q96SF7 602 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 SDHCQ99643 169 aaPredicted RBP7.9□□□□□ -1.14
DDX39A-220ENST00000593008 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.9□□□□□ -1.14
DDX39A-220ENST00000593008 DIABLOQ9NR28 239 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 CALYQ9NYX4 217 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 OR1A1Q9P1Q5 309 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 A3GALT2U3KPV4 340 aa7.9□□□□□ -1.14
DDX39A-220ENST00000593008 KIAA2026Q5HYC2 2103 aa7.9□□□□□ -1.15
DDX39A-220ENST00000593008 WNK2Q9Y3S1 2297 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 TRBV23-1A0A0A0MS06 115 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 A0A1W2PPE3 182 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 A0A1W2PRD5 423 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 A0A1W2PRF3 423 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 A0A1W2PRM7 423 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 J3QLI3 93 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 J3QRK9 145 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 GSTP1P09211 210 aaKnown RBP7.89□□□□□ -1.15
DDX39A-220ENST00000593008 SCTP09683 121 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 GSTT2P0CG29 244 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 GSTT2BP0CG30 244 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 CGB3P0DN86 165 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 CGB7P0DN87 165 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 MMP9P14780 707 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 EPHA1P21709 976 aa7.89□□□□□ -1.15
DDX39A-220ENST00000593008 PAX6P26367 422 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms