RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 IGLL1P15814 213 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 IGFBP3P17936 291 aaPredicted RBP10.53□□□□□ -0.72
APOC1-209ENST00000592885 FSTP19883 344 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 GNG10P50151 68 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 EBI3Q14213 229 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 SMN1Q16637 294 aaKnown RBP10.53□□□□□ -0.72
APOC1-209ENST00000592885 YIF1BQ5BJH7 314 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 OR2G6Q5TZ20 316 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 IZUMO1Q8IYV9 350 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 LINC00311Q8N616 119 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 SETD9Q8NE22 299 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 LEAP2Q969E1 77 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 ING4Q9UNL4 249 aa10.53□□□□□ -0.72
APOC1-209ENST00000592885 SH2D7A6NKC9 451 aaPredicted RBP10.52□□□□□ -0.73
APOC1-209ENST00000592885 C15orf65H3BRN8 121 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 GEMIN2O14893 280 aaKnown RBP10.52□□□□□ -0.73
APOC1-209ENST00000592885 TXNL1O43396 289 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 IGHG2P01859 326 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 GAPDHP04406 335 aaKnown RBP10.52□□□□□ -0.73
APOC1-209ENST00000592885 GTF2F2P13984 249 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 SERPINA2P20848 420 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 IL3RAP26951 378 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 TAS2R43P59537 309 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 LTC4SQ16873 150 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 Q499Y3 187 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 TTC23Q5W5X9 447 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 DMKNQ6E0U4 476 aaPredicted RBP10.52□□□□□ -0.73
APOC1-209ENST00000592885 FOXRED2Q8IWF2 684 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 CDH26Q8IXH8 852 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 STX19Q8N4C7 294 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 LINC00482Q8N8I6 264 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 RFESDQ8TAC1 157 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 MRPS24Q96EL2 167 aaKnown RBP10.52□□□□□ -0.73
APOC1-209ENST00000592885 ZNF184Q99676 751 aaPredicted RBP10.52□□□□□ -0.73
APOC1-209ENST00000592885 ZFP57Q9NU63 452 aa10.52□□□□□ -0.73
APOC1-209ENST00000592885 CHCHD3Q9NX63 227 aaKnown RBP10.52□□□□□ -0.73
APOC1-209ENST00000592885 IGHV1-3A0A0C4DH29 117 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 SERPINE3A8MV23 424 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 CCRL2O00421 344 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 EBAG9O00559 213 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 SDCBPO00560 298 aaPredicted RBP10.51□□□□□ -0.73
APOC1-209ENST00000592885 IGKV1D-33P01593 117 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 IGKV1-33P01594 117 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 IGHV3-7P01780 117 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 RPL23AP62750 156 aaKnown RBP10.51□□□□□ -0.73
APOC1-209ENST00000592885 SLC35B1P78383 322 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 DIAPH2-AS1Q14236 149 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 TRAT1Q6PIZ9 186 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 C10orf99Q6UWK7 81 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 ZNF497Q6ZNH5 498 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 SLC35E3Q7Z769 313 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 TGIF2LXQ8IUE1 241 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 PACRGLQ8N7B6 248 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 THRSPQ92748 146 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 DPF1Q92782 380 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 GHSRQ92847 366 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 ARL11Q969Q4 196 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 TMEM80Q96HE8 168 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 MCRIP2Q9BUT9 160 aaKnown RBP10.51□□□□□ -0.73
APOC1-209ENST00000592885 LIN7CQ9NUP9 197 aaKnown RBP10.51□□□□□ -0.73
APOC1-209ENST00000592885 GFOD1Q9NXC2 390 aa10.51□□□□□ -0.73
APOC1-209ENST00000592885 RCC2Q9P258 522 aaKnown RBP10.51□□□□□ -0.73
APOC1-209ENST00000592885 SIRT4Q9Y6E7 314 aaPredicted RBP10.51□□□□□ -0.73
APOC1-209ENST00000592885 FAM90A10PA6NDY2 464 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 FAM90A7PA6NKC0 464 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 FAM90A23PA8MXZ1 464 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 AIPO00170 330 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 CA11O75493 328 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 BAG2O95816 211 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 ZNF137PP52743 207 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 EGFEM1PQ0D2K5 195 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 SLC22A6Q4U2R8 563 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 ATAD3CQ5T2N8 411 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 C6orf183Q5T699 404 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 ETV3LQ6ZN32 361 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 Q8N6K4 173 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 OR8H1Q8NGG4 311 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 OR2T10Q8NGZ9 312 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 NEK7Q8TDX7 302 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 PGLYRP3Q96LB9 341 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 GON7Q9BXV9 100 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 ZNF581Q9P0T4 197 aa10.5□□□□□ -0.73
APOC1-209ENST00000592885 MRPS28Q9Y2Q9 187 aaKnown RBP10.5□□□□□ -0.73
APOC1-209ENST00000592885 TRBV5-7A0A0A0MS05 114 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 TRAV39A0A0B4J263 110 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 MCRIP1C9JLW8 97 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 AP4M1O00189 453 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 LALBAP00709 142 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 MT-ND4P03905 459 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 CD1AP06126 327 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 GLAP06280 429 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 CD1BP29016 333 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 MYCNOSP40205 109 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 THBS3P49746 956 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 RPS11P62280 158 aaKnown RBP eCLIP10.49□□□□□ -0.73
APOC1-209ENST00000592885 DCTN2Q13561 401 aaKnown RBP10.49□□□□□ -0.73
APOC1-209ENST00000592885 OR2W3Q7Z3T1 314 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 MOB3BQ86TA1 216 aa10.49□□□□□ -0.73
APOC1-209ENST00000592885 MRPL41Q8IXM3 137 aaKnown RBP10.49□□□□□ -0.73
APOC1-209ENST00000592885 GAPTQ8N292 157 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms