RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 VSIG10L2P0DP72 767 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 CD37P11049 281 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 MAPK3P27361 379 aaPredicted RBP16.12■□□□□ 0.17
CIRBP-239ENST00000592467 CEACAM3P40198 252 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 DIAPH2-AS1Q14236 149 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 LTC4SQ16873 150 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 ATAD3CQ5T2N8 411 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 FAM53AQ6NSI3 398 aaPredicted RBP16.12■□□□□ 0.17
CIRBP-239ENST00000592467 SLC16A12Q6ZSM3 486 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 Q6ZTK2 550 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 C16orf82Q7Z2V1 217 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 MS4A15Q8N5U1 240 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 NKAIN3Q8N8D7 197 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 C11orf44Q8N8P7 122 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 THRSPQ92748 146 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 Q96M66 194 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 UQCC2Q9BRT2 126 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 BANF2Q9H503 90 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 LIN7BQ9HAP6 207 aa16.12■□□□□ 0.17
CIRBP-239ENST00000592467 A0A1W2PPI3 338 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 H0YHG0 523 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 GZMHP20718 246 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 BRS3P32247 399 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 VHLP40337 213 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 LOXL3P58215 753 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 RBM39Q14498 530 aaKnown RBP16.11■□□□□ 0.17
CIRBP-239ENST00000592467 C2orf68Q2NKX9 166 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 TMEM95Q3KNT9 176 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 AWAT2Q6E213 333 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 RBM14Q96PK6 669 aaKnown RBP16.11■□□□□ 0.17
CIRBP-239ENST00000592467 SCN3BQ9NY72 215 aa16.11■□□□□ 0.17
CIRBP-239ENST00000592467 FAM90A10PA6NDY2 464 aa16.1■□□□□ 0.17
CIRBP-239ENST00000592467 FAM90A7PA6NKC0 464 aa16.1■□□□□ 0.17
CIRBP-239ENST00000592467 FAM90A23PA8MXZ1 464 aa16.1■□□□□ 0.17
CIRBP-239ENST00000592467 CD28P10747 220 aa16.1■□□□□ 0.17
CIRBP-239ENST00000592467 MGMTP16455 207 aa16.1■□□□□ 0.17
CIRBP-239ENST00000592467 GPR50Q13585 617 aa16.1■□□□□ 0.17
CIRBP-239ENST00000592467 TMED9Q9BVK6 235 aa16.1■□□□□ 0.17
CIRBP-239ENST00000592467 PRKDCP78527 4128 aaKnown RBP16.09■□□□□ 0.17
CIRBP-239ENST00000592467 ADARB2-AS1A8MUL3 147 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 ORC5O43913 435 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 OR2F2O95006 317 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 CSF1P09603 554 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 CRHBPP24387 322 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 GNG10P50151 68 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 MED22Q15528 200 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 C1orf100Q5SVJ3 147 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 RAB12Q6IQ22 244 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 CCDC144NLQ6NUI1 221 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 OR52M1Q8NGK5 317 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 FAM110DQ8TAY7 271 aaPredicted RBP16.09■□□□□ 0.17
CIRBP-239ENST00000592467 UBALD1Q8TB05 177 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 CCDC107Q8WV48 283 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 PHYHIPQ92561 330 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 SLC25A33Q9BSK2 321 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 SELENOIQ9C0D9 397 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 SPACA1Q9HBV2 294 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 TPRKBQ9Y3C4 175 aa16.09■□□□□ 0.17
CIRBP-239ENST00000592467 A0A1W2PPE3 182 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 AIPO00170 330 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 UCHL1P09936 223 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 TPBGQ13641 420 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 TMEM91Q6ZNR0 172 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 THNSL2Q86YJ6 484 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 TOMM40LQ969M1 308 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 ARL11Q969Q4 196 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 RPEQ96AT9 228 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 GFOD1Q9NXC2 390 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 GHRLQ9UBU3 117 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 AMMECR1Q9Y4X0 333 aaPredicted RBP16.08■□□□□ 0.16
CIRBP-239ENST00000592467 PEX16Q9Y5Y5 336 aa16.08■□□□□ 0.16
CIRBP-239ENST00000592467 ERICH4A6NGS2 130 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 C12orf77C9JDV5 145 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 MCRIP1C9JLW8 97 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 FBXO24O75426 580 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 CRTAPO75718 401 aaPredicted RBP16.07■□□□□ 0.16
CIRBP-239ENST00000592467 ARHGDIBP52566 201 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 DEFA6Q01524 100 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 MADCAM1Q13477 382 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 LIPKQ5VXJ0 399 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 CEACAM19Q7Z692 300 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 LINC00311Q8N616 119 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 C8orf31Q8N9H6 132 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 OR4K15Q8NH41 348 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 GFI1Q99684 422 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 ISYNA1Q9NPH2 558 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 ETAA1Q9NY74 926 aa16.07■□□□□ 0.16
CIRBP-239ENST00000592467 SH2D7A6NKC9 451 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-239ENST00000592467 RGS10O43665 173 aa16.06■□□□□ 0.16
CIRBP-239ENST00000592467 GLAP06280 429 aa16.06■□□□□ 0.16
CIRBP-239ENST00000592467 SNRNP70P08621 437 aaKnown RBP16.06■□□□□ 0.16
CIRBP-239ENST00000592467 VSIG8P0DPA2 414 aa16.06■□□□□ 0.16
CIRBP-239ENST00000592467 SRMP19623 302 aa16.06■□□□□ 0.16
CIRBP-239ENST00000592467 FUT3P21217 361 aa16.06■□□□□ 0.16
CIRBP-239ENST00000592467 MNDAP41218 407 aa16.06■□□□□ 0.16
CIRBP-239ENST00000592467 VDAC2P45880 294 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-239ENST00000592467 QRFPP83859 136 aa16.06■□□□□ 0.16
CIRBP-239ENST00000592467 SYT6Q5T7P8 510 aaPredicted RBP16.06■□□□□ 0.16
CIRBP-239ENST00000592467 OR10K2Q6IF99 312 aa16.06■□□□□ 0.16
CIRBP-239ENST00000592467 IZUMO2Q6UXV1 221 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms