RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 RFESDQ8TAC1 157 aa14.93□□□□□ -0.02
CCDC43-205ENST00000592333 SMIM19Q96E16 107 aa14.93□□□□□ -0.02
CCDC43-205ENST00000592333 MRPS24Q96EL2 167 aaKnown RBP14.93□□□□□ -0.02
CCDC43-205ENST00000592333 SPACA1Q9HBV2 294 aa14.93□□□□□ -0.02
CCDC43-205ENST00000592333 S100A14Q9HCY8 104 aa14.93□□□□□ -0.02
CCDC43-205ENST00000592333 BABAM2Q9NXR7 383 aa14.93□□□□□ -0.02
CCDC43-205ENST00000592333 SH2D7A6NKC9 451 aaPredicted RBP14.92□□□□□ -0.02
CCDC43-205ENST00000592333 HSD17B6O14756 317 aa14.92□□□□□ -0.02
CCDC43-205ENST00000592333 GTF2F2P13984 249 aa14.92□□□□□ -0.02
CCDC43-205ENST00000592333 BDKRB2P30411 391 aa14.92□□□□□ -0.02
CCDC43-205ENST00000592333 SSTR5P35346 364 aa14.92□□□□□ -0.02
CCDC43-205ENST00000592333 MYCNOSP40205 109 aa14.92□□□□□ -0.02
CCDC43-205ENST00000592333 THBS3P49746 956 aa14.92□□□□□ -0.02
CCDC43-205ENST00000592333 GP2P55259 537 aaKnown RBP14.92□□□□□ -0.02
CCDC43-205ENST00000592333 DDI2Q5TDH0 399 aa14.92□□□□□ -0.02
CCDC43-205ENST00000592333 MRPL41Q8IXM3 137 aaKnown RBP14.92□□□□□ -0.02
CCDC43-205ENST00000592333 OR10K1Q8NGX5 313 aa14.92□□□□□ -0.02
CCDC43-205ENST00000592333 ING4Q9UNL4 249 aa14.92□□□□□ -0.02
CCDC43-205ENST00000592333 IGHV1-3A0A0C4DH29 117 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 SERPINE3A8MV23 424 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 C15orf65H3BRN8 121 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 K7EIL1 84 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 TXNL1O43396 289 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 WBP4O75554 376 aaKnown RBP14.91□□□□□ -0.02
CCDC43-205ENST00000592333 CDRT1O95170 752 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 IGKV1D-33P01593 117 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 IGKV1-33P01594 117 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 IGFBP3P17936 291 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-205ENST00000592333 IL3RAP26951 378 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 GNG10P50151 68 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 MED21Q13503 144 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 OR2W3Q7Z3T1 314 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 SLC35E3Q7Z769 313 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 CDH26Q8IXH8 852 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 OR8H1Q8NGG4 311 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 LEAP2Q969E1 77 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 LIN7CQ9NUP9 197 aaKnown RBP14.91□□□□□ -0.02
CCDC43-205ENST00000592333 SMPD3Q9NY59 655 aaPredicted RBP14.91□□□□□ -0.02
CCDC43-205ENST00000592333 CKLFQ9UBR5 152 aa14.91□□□□□ -0.02
CCDC43-205ENST00000592333 DIMT1Q9UNQ2 313 aaKnown RBP14.91□□□□□ -0.02
CCDC43-205ENST00000592333 EXOSC1Q9Y3B2 195 aaKnown RBP14.91□□□□□ -0.02
CCDC43-205ENST00000592333 AP4M1O00189 453 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 GEMIN2O14893 280 aaKnown RBP14.9□□□□□ -0.02
CCDC43-205ENST00000592333 MYL12AP19105 171 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 CD1BP29016 333 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 RIPK1Q13546 671 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 DIAPH2-AS1Q14236 149 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 YIF1BQ5BJH7 314 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 VAX1Q5SQQ9 334 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 STEAP3Q658P3 488 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 TEX38Q6PEX7 206 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 ETV3LQ6ZN32 361 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 ZNF497Q6ZNH5 498 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 ZNF329Q86UD4 541 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 STPG2Q8N412 459 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 STX19Q8N4C7 294 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 Q8N6K4 173 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 OR2T10Q8NGZ9 312 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 ARL11Q969Q4 196 aa14.9□□□□□ -0.02
CCDC43-205ENST00000592333 TRBV5-5A0A0J9YX44 114 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 CA11O75493 328 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 IGHV3-7P01780 117 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 FSTP19883 344 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 ETV1P50549 477 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 ZNF137PP52743 207 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 LTC4SQ16873 150 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 Q499Y3 187 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 XAF1Q6GPH4 301 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 TRAT1Q6PIZ9 186 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 ST6GALNAC6Q969X2 333 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 EAF1Q96JC9 268 aaPredicted RBP14.89□□□□□ -0.03
CCDC43-205ENST00000592333 P2RX4Q99571 388 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 ABCG5Q9H222 651 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 C8orf4Q9NR00 106 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 GFOD1Q9NXC2 390 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 ZNF580Q9UK33 172 aa14.89□□□□□ -0.03
CCDC43-205ENST00000592333 FAM90A10PA6NDY2 464 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 FAM90A7PA6NKC0 464 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 FAM90A23PA8MXZ1 464 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 SDCBPO00560 298 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-205ENST00000592333 MT-ND4P03905 459 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 GLAP06280 429 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 SERPINA2P20848 420 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 KRTAP10-11P60412 298 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 HNF4GQ14541 408 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 PNLIPRP3Q17RR3 467 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 ATAD3CQ5T2N8 411 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 OR2G6Q5TZ20 316 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 DMKNQ6E0U4 476 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-205ENST00000592333 MOB3BQ86TA1 216 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 ZNF695Q8IW36 515 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 GAPTQ8N292 157 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 TMEM104Q8NE00 496 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 GHSRQ92847 366 aa14.88□□□□□ -0.03
CCDC43-205ENST00000592333 NOL4LQ96MY1 436 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-205ENST00000592333 ZNF184Q99676 751 aaPredicted RBP14.88□□□□□ -0.03
CCDC43-205ENST00000592333 CHCHD3Q9NX63 227 aaKnown RBP14.88□□□□□ -0.03
CCDC43-205ENST00000592333 RCC2Q9P258 522 aaKnown RBP14.88□□□□□ -0.03
CCDC43-205ENST00000592333 MCRIP1C9JLW8 97 aa14.87□□□□□ -0.03
CCDC43-205ENST00000592333 H0YHG0 523 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms