RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 MIOXQ9UGB7 285 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 CARHSP1Q9Y2V2 147 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 PLXNB3Q9ULL4 1909 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 MDC1Q14676 2089 aaKnown RBP14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 DUXBA0A1W2PPF3 345 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 NKX6-3A6NJ46 265 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 FGF12P61328 243 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 ZADH2Q8N4Q0 377 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 ZNF441Q8N8Z8 693 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 OR2Z1Q8NG97 314 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 SAP25Q8TEE9 199 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 LURAP1Q96LR2 239 aa14.82□□□□□ -0.04
SMARCA4-215ENST00000590574 DANCRP0C864 163 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 KLK2P20151 261 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 MPLP40238 635 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 USB1Q9BQ65 265 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 TMEM147Q9BVK8 224 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 PPP1CCP36873 323 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 ERVS71-1P61550 626 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 SRSF3P84103 164 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 DHRS13Q6UX07 377 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 CEP290O15078 2479 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 SEC14L6B5MCN3 397 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 SOX15O60248 233 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 DMWDQ09019 674 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 NFAM1Q8NET5 270 aaPredicted RBP14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 TM2D1Q9BX74 207 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 G3V3Q6 166 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 FAM131CQ96AQ9 280 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 DAZAP1Q96EP5 407 aaKnown RBP14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 KIAA1456Q9P272 454 aa14.81□□□□□ -0.04
SMARCA4-215ENST00000590574 A0A0A6YYD4 124 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 J3QT63 122 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 OR10S1Q8NGN2 331 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 AKIRIN1Q9H9L7 192 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 DECR2Q9NUI1 292 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 NAT8Q9UHE5 227 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 CRYAAP02489 173 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 PMS2CLQ68D20 193 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 C1orf210Q8IVY1 113 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 SELENOHQ8IZQ5 122 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 TP53BP1Q12888 1972 aaPredicted RBP14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 XKRY2A2RUG3 117 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 RRP8O43159 456 aaKnown RBP14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 MT-CO3P00414 261 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 NPBWR2P48146 333 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 LINC00596Q86U02 117 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 WNT5BQ9H1J7 359 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 HAND1O96004 215 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 OPN1MWP04001 364 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 OPN1MW2P0DN77 364 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 OPN1MW3P0DN78 364 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 F2RP25116 425 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 IGFBP7Q16270 282 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 TMEM230Q96A57 120 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 PRO1933Q9H354 126 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 SIRT7Q9NRC8 400 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 ZNF319Q9P2F9 582 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 VAX2Q9UIW0 290 aa14.8□□□□□ -0.04
SMARCA4-215ENST00000590574 KCNMB1Q16558 191 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 DEFB123Q8N688 67 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 SCCPDHQ8NBX0 429 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 B4DEV8 164 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 YIF1AO95070 293 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 CHRNA7P36544 502 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 CDC34P49427 236 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 CISD2Q8N5K1 135 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 CORO2AQ92828 525 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 H0Y980 276 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 H0YIZ8 118 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 OR7C2O60412 319 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 ATP6V1FQ16864 119 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 LYRM2Q9NU23 88 aaPredicted RBP14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 TRAPPC1Q9Y5R8 145 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 IGKV1-9A0A0C4DH69 117 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 APOA2P02652 100 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 G6PCP35575 357 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 BSXQ3C1V8 233 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 PHYHD1Q5SRE7 291 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 FAM166AQ6J272 317 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 TP53RKQ96S44 253 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 SMDT1Q9H4I9 107 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 ZDHHC11Q9H8X9 412 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 SYNGR1O43759 233 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 IGHV3-13P01766 116 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 IGHV3-7P01780 117 aa14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 NUFIP2Q7Z417 695 aaKnown RBP14.79□□□□□ -0.04
SMARCA4-215ENST00000590574 LRRC30A6NM36 301 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 HLA-GP17693 338 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 MPZP25189 248 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 RTL8BQ17RB0 113 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 IER2Q9BTL4 223 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 RSG1Q9BU20 258 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 SPRY3O43610 288 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 EIF3GO75821 320 aaKnown RBP eCLIP14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 STARD6P59095 220 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 KHDC3LQ587J8 217 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 SLC25A53Q5H9E4 307 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 NSUN5P2Q63ZY6 315 aa14.78□□□□□ -0.04
SMARCA4-215ENST00000590574 DPPA3Q6W0C5 159 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms