RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 UQCC2Q9BRT2 126 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 TMED9Q9BVK6 235 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 DPCDQ9BVM2 203 aaPredicted RBP9.04□□□□□ -0.96
SMAD4-211ENST00000590499 C16orf95Q9H693 158 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 ISYNA1Q9NPH2 558 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 ING3Q9NXR8 418 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 OR6C3Q9NZP0 311 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 RCC2Q9P258 522 aaKnown RBP9.04□□□□□ -0.96
SMAD4-211ENST00000590499 KIF25Q9UIL4 384 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 MINOS1-NBL1R4GNA1 71 aa9.04□□□□□ -0.96
SMAD4-211ENST00000590499 MEIKINA0A087WXM9 373 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 KBTBD11-OT1A0A1B0GTJ5 212 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 NPIPB11E5RHQ5 1161 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 CHST1O43916 411 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 BPNT1O95861 308 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 PF4P02776 101 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 UCHL1P09936 223 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 VHLP40337 213 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 GLP1RP43220 463 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 DYNLT3P51808 116 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 PROK1P58294 105 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 MLLT11Q13015 90 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-211ENST00000590499 DYNC1I2Q13409 638 aaKnown RBP9.03□□□□□ -0.96
SMAD4-211ENST00000590499 GPR176Q14439 515 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 TBCEQ15813 527 aaPredicted RBP9.03□□□□□ -0.96
SMAD4-211ENST00000590499 SSX2Q16385 188 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 LY6EQ16553 131 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 RBM48Q5RL73 367 aaKnown RBP9.03□□□□□ -0.96
SMAD4-211ENST00000590499 LIPKQ5VXJ0 399 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 AWAT2Q6E213 333 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 SLC35E4Q6ICL7 350 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 TMEM91Q6ZNR0 172 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 RTN4RL2Q86UN3 420 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 ABHD12Q8N2K0 398 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 TMEM104Q8NE00 496 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 UFD1Q92890 307 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 MRPS24Q96EL2 167 aaKnown RBP9.03□□□□□ -0.96
SMAD4-211ENST00000590499 Q96M66 194 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 S100A13Q99584 98 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 BARHL1Q9BZE3 327 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 ZNF286AQ9HBT8 521 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 PCDHB16Q9NRJ7 776 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 CALYQ9NYX4 217 aa9.03□□□□□ -0.96
SMAD4-211ENST00000590499 FAM172BPA6NC97 362 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 A6NDX4 124 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 IL1AP01583 271 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 CPEP16870 476 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 HTR1DP28221 377 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 MAP2K4P45985 399 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 KRTAP10-3P60369 221 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 RPS25P62851 125 aaKnown RBP9.02□□□□□ -0.97
SMAD4-211ENST00000590499 TAGLNQ01995 201 aaKnown RBP9.02□□□□□ -0.97
SMAD4-211ENST00000590499 FAM189A2Q15884 450 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 C1orf100Q5SVJ3 147 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 CCBE1Q6UXH8 406 aaPredicted RBP9.02□□□□□ -0.97
SMAD4-211ENST00000590499 CEACAM19Q7Z692 300 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 ZNF565Q8N9K5 539 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 SGMS2Q8NHU3 365 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 CITED1Q99966 193 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 TCF19Q9Y242 345 aa9.02□□□□□ -0.97
SMAD4-211ENST00000590499 TRAV39A0A0B4J263 110 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 TMEM30CPA0ZSE6 113 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A10PA6NDY2 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A18PA6NE21 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A16PA6NEW6 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A20PA6NIJ5 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A7PA6NKC0 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A22PA8MWA6 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A12PA8MX19 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A5PA8MXJ8 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A23PA8MXZ1 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 LY6LH3BQJ8 138 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A15PP0C7V4 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A13PP0C7W8 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A14PP0C7W9 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 FAM90A24PP0C7X0 464 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 MGMTP16455 207 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 SRMP19623 302 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 SSTR5P35346 364 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 RAB13P51153 203 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 SRSF4Q08170 494 aaKnown RBP9.01□□□□□ -0.97
SMAD4-211ENST00000590499 HLA-DRB5Q30154 266 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 HSD17B12Q53GQ0 312 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 PLA1AQ53H76 456 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 PRR31Q5SQ13 230 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 SIGIRRQ6IA17 410 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 KRTAP5-3Q6L8H2 238 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 ZNF497Q6ZNH5 498 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 GAPTQ8N292 157 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 ZNF596Q8TC21 504 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 MRGPRDQ8TDS7 321 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 TMEM203Q969S6 136 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 CYYR1Q96J86 154 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 GFI1Q99684 422 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 MGLLQ99685 303 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 CCDC90BQ9GZT6 254 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 BANF2Q9H503 90 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 RANBP3Q9H6Z4 567 aaPredicted RBP9.01□□□□□ -0.97
SMAD4-211ENST00000590499 SPACA1Q9HBV2 294 aa9.01□□□□□ -0.97
SMAD4-211ENST00000590499 TCF7L1Q9HCS4 588 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms