RNA–Protein interactions for RNA: ENST00000589949.1

H3F3B-209, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 842 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-209ENST00000589949 MPIG6BO95866 241 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 PF4P02776 101 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 IGFBP3P17936 291 aaPredicted RBP14.24□□□□□ -0.13
H3F3B-209ENST00000589949 CAPGP40121 348 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 RPS11P62280 158 aaKnown RBP eCLIP14.24□□□□□ -0.13
H3F3B-209ENST00000589949 ADARB1P78563 741 aaKnown RBP14.24□□□□□ -0.13
H3F3B-209ENST00000589949 MED21Q13503 144 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 DOC2BQ14184 412 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 NHLRC3Q5JS37 347 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 KHDC1LQ5JSQ8 128 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 DDI2Q5TDH0 399 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 LINC00482Q8N8I6 264 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 ZNF485Q8NCK3 441 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 OR52N1Q8NH53 320 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 TMEM138Q9NPI0 162 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 IL36GQ9NZH8 169 aa14.24□□□□□ -0.13
H3F3B-209ENST00000589949 AMMECR1Q9Y4X0 333 aaPredicted RBP14.24□□□□□ -0.13
H3F3B-209ENST00000589949 TRAV8-7A0A075B6U6 113 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 IGHV3-72A0A0B4J1Y9 119 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 TRBV5-5A0A0J9YX44 114 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 PSMB11A5LHX3 300 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 OR7C1O76099 320 aaPredicted RBP14.23□□□□□ -0.13
H3F3B-209ENST00000589949 IGKV1D-33P01593 117 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 IGKV1-33P01594 117 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 TMEM11P17152 192 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 DCKP27707 260 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 ZNF93P35789 620 aaPredicted RBP14.23□□□□□ -0.13
H3F3B-209ENST00000589949 REG1BP48304 166 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 KCNJ3P48549 501 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 HES1Q14469 280 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 TTC23Q5W5X9 447 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 ZFP41Q8N8Y5 198 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 ZNF555Q8NEP9 628 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 HAVCR2Q8TDQ0 301 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 SMIM19Q96E16 107 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 CPNE2Q96FN4 548 aaPredicted RBP14.23□□□□□ -0.13
H3F3B-209ENST00000589949 METTL9Q9H1A3 318 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 PCDHB16Q9NRJ7 776 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 BABAM2Q9NXR7 383 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 ZNF281Q9Y2X9 895 aa14.23□□□□□ -0.13
H3F3B-209ENST00000589949 WI2-2373I1.2A0A1W2PRP0 233 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 CD2P06729 351 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 SERPINA2P20848 420 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 BDKRB2P30411 391 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 RAB7AP51149 207 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 SLC35A2P78381 396 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 DMKNQ6E0U4 476 aaPredicted RBP14.22□□□□□ -0.13
H3F3B-209ENST00000589949 SLC16A12Q6ZSM3 486 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 MRPL41Q8IXM3 137 aaKnown RBP14.22□□□□□ -0.13
H3F3B-209ENST00000589949 OR8H3Q8N146 312 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 OR10A7Q8NGE5 316 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 CCDC107Q8WV48 283 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 CYGBQ8WWM9 190 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 GHSRQ92847 366 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 ANKRD60Q9BZ19 345 aa14.22□□□□□ -0.13
H3F3B-209ENST00000589949 DIMT1Q9UNQ2 313 aaKnown RBP14.22□□□□□ -0.13
H3F3B-209ENST00000589949 IGHV1-3A0A0C4DH29 117 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 HSD17B6O14756 317 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 MT-ND4P03905 459 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 HOXD3P31249 432 aaPredicted RBP14.21□□□□□ -0.13
H3F3B-209ENST00000589949 RPL23AP62750 156 aaKnown RBP14.21□□□□□ -0.13
H3F3B-209ENST00000589949 ZNF816Q0VGE8 651 aaPredicted RBP14.21□□□□□ -0.13
H3F3B-209ENST00000589949 EBI3Q14213 229 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 SLC22A6Q4U2R8 563 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 TMPRSS11AQ6ZMR5 421 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 Q8N6K4 173 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 OR10X1Q8NGY0 326 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 ST6GALNAC6Q969X2 333 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 RCC1LQ96I51 464 aaKnown RBP14.21□□□□□ -0.13
H3F3B-209ENST00000589949 PGLYRP3Q96LB9 341 aa14.21□□□□□ -0.13
H3F3B-209ENST00000589949 IGHV3-43A0A0B4J1X8 118 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 A0A1W2PPK0 400 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 TMEM30CPA0ZSE6 113 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 ZNF736B4DX44 427 aaPredicted RBP14.2□□□□□ -0.14
H3F3B-209ENST00000589949 SLC31A2O15432 143 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 FGF16O43320 207 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 IGHV3-43DP0DP04 118 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 GZMHP20718 246 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 MYF6P23409 242 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 PPP3R1P63098 170 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 ATAD3CQ5T2N8 411 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 LAIR2Q6ISS4 152 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 ZNF497Q6ZNH5 498 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 OR2W3Q7Z3T1 314 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 MOB3BQ86TA1 216 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 TMEM104Q8NE00 496 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 ARL11Q969Q4 196 aa14.2□□□□□ -0.14
H3F3B-209ENST00000589949 EAF1Q96JC9 268 aaPredicted RBP14.2□□□□□ -0.14
H3F3B-209ENST00000589949 TRBV5-7A0A0A0MS05 114 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 CCRL2O00421 344 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 SDCBPO00560 298 aaPredicted RBP14.19□□□□□ -0.14
H3F3B-209ENST00000589949 GPX5O75715 221 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 IGHG2P01859 326 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 CSTBP04080 98 aaKnown RBP14.19□□□□□ -0.14
H3F3B-209ENST00000589949 THBS3P49746 956 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 EGFEM1PQ0D2K5 195 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 MPV17LQ2QL34 196 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 C8orf86Q6ZUL3 223 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 C5orf24Q7Z6I8 188 aa14.19□□□□□ -0.14
H3F3B-209ENST00000589949 OR52M1Q8NGK5 317 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms