RNA–Protein interactions for RNA: ENST00000589838.5

PRKCSH-209, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKCSH, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-209ENST00000589838 KIR2DL2P43627 348 aaPredicted RBP16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 NOVA1P51513 510 aaKnown RBP16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 PSG7Q13046 419 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 ZNF497Q6ZNH5 498 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 Q6ZRG5 221 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 WDR86Q86TI4 376 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 COMMD1Q8N668 190 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 C11orf1Q9H5F2 150 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 PLEKHF2Q9H8W4 249 aa16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 ERRFI1Q9UJM3 462 aaPredicted RBP16.27■□□□□ 0.19
PRKCSH-209ENST00000589838 WDFY4Q6ZS81 3184 aa16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 DNASE2O00115 360 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 SLC33A1O00400 549 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 SPP1P10451 314 aa16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 ZNF154Q13106 437 aa16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 NMSQ5H8A3 153 aa16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 OR10V1Q8NGI7 309 aa16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 LILRB1Q8NHL6 650 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 AKR1E2Q96JD6 320 aa16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 WFDC1Q9HC57 220 aa16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 LUZP4Q9P127 313 aa16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 TRAPPC2LQ9UL33 140 aa16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 STRAPQ9Y3F4 350 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-209ENST00000589838 RNASEK-C17orf49H0YIS7 233 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 SIRPB1O00241 398 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 IGKV3-15P01624 115 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 DANCRP0C864 163 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 ERVS71-1P61550 626 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 EWSR1Q01844 656 aaKnown RBP eCLIP16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 DEFB109BQ30KR1 87 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 C9orf106Q8NAJ2 232 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 LYPD6BQ8NI32 183 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 KLF14Q8TD94 323 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 BSCL2Q96G97 398 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 OBP2BQ9NPH6 170 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 PLSCR4Q9NRQ2 329 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 CDIPTO14735 213 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 SIGLEC5O15389 551 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 SNAPINO95295 136 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 SLC25A6P12236 298 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 WT1P19544 449 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 SPINK2P20155 84 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 ARHGDIBP52566 201 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 SRSF3P84103 164 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 ID3Q02535 119 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 NHLH2Q02577 135 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 ZNF266Q14584 549 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 CLEC9AQ6UXN8 241 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 C1orf174Q8IYL3 243 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 WDR31Q8NA23 367 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 OR8G5Q8NG78 346 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 IL1F10Q8WWZ1 152 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 PLA2G2EQ9NZK7 142 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 TAAR3PQ9P1P4 343 aa16.25■□□□□ 0.19
PRKCSH-209ENST00000589838 CEACAM4O75871 244 aa16.24■□□□□ 0.19
PRKCSH-209ENST00000589838 SERPINE2P07093 398 aa16.24■□□□□ 0.19
PRKCSH-209ENST00000589838 GRPP07492 148 aa16.24■□□□□ 0.19
PRKCSH-209ENST00000589838 POLR2GP62487 172 aaKnown RBP eCLIP16.24■□□□□ 0.19
PRKCSH-209ENST00000589838 ZADH2Q8N4Q0 377 aa16.24■□□□□ 0.19
PRKCSH-209ENST00000589838 BCL2L14Q9BZR8 327 aa16.24■□□□□ 0.19
PRKCSH-209ENST00000589838 LYRM2Q9NU23 88 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-209ENST00000589838 WIPI2Q9Y4P8 454 aa16.24■□□□□ 0.19
PRKCSH-209ENST00000589838 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 WRBO00258 174 aa16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 PITX3O75364 302 aa16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 TSPAN15O95858 294 aa16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 MUC1P15941 1255 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 ADCYAP1P18509 176 aa16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 DVL1P1P54792 670 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 ACSF3Q4G176 576 aaPredicted RBP16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 SNIP1Q8TAD8 396 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 PLPPR1Q8TBJ4 325 aa16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 CXXC4Q9H2H0 198 aa16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 PURGQ9UJV8 347 aaKnown RBP16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 ARID1AO14497 2285 aa16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 FREM2Q5SZK8 3169 aa16.23■□□□□ 0.19
PRKCSH-209ENST00000589838 A0A1B0GU03 582 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 FAM24AA6NFZ4 105 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 NUPL2O15504 423 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 HSPA12AO43301 675 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 CD5P06127 495 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 BAXQ07812 192 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 ALKBH6Q3KRA9 238 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 VWA1Q6PCB0 445 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 PUSL1Q8N0Z8 303 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 TMEM231Q9H6L2 316 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 MBNL3Q9NUK0 354 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 KCNIP1Q9NZI2 227 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 MUC3AQ02505 3323 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 TNFSF12O43508 249 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 SSSCA1O60232 199 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 WDR1O75083 606 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 HAND1O96004 215 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 MPV17P39210 176 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 EIF2S3P41091 472 aaKnown RBP16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 CAMLGP49069 296 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 P2RY6Q15077 328 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 IGFBP7Q16270 282 aa16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 CXorf66Q5JRM2 361 aaPredicted RBP16.22■□□□□ 0.19
PRKCSH-209ENST00000589838 TLNRD1Q9H1K6 362 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms