RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 CGB3P0DN86 165 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 CGB7P0DN87 165 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 CD99P14209 185 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 GATA3P23771 443 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 PTBP1P26599 531 aaKnown RBP eCLIP12.49□□□□□ -0.41
ATG4D-211ENST00000589753 CBX5P45973 191 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 ARF6P62330 175 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF554Q86TJ5 538 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 KIR3DL3Q8N743 410 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 OCSTAMPQ9BR26 566 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 ST6GALNAC5Q9BVH7 336 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 TMUB1Q9BVT8 246 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 CALYQ9NYX4 217 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF230Q9UIE0 474 aaPredicted RBP12.49□□□□□ -0.41
ATG4D-211ENST00000589753 DOCK11Q5JSL3 2073 aa12.49□□□□□ -0.41
ATG4D-211ENST00000589753 KBTBD11-OT1A0A1B0GTJ5 212 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 hCG_1809904A0A1W2PP81 198 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 A0A1W2PPE2 198 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 A0A1W2PR64 198 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 A0A1W2PRV1 198 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 MEIS3P1A6NDR6 274 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 C12orf77C9JDV5 145 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 M0R1W7 72 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 SULT1C2O00338 296 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 CTDSPLO15194 276 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 SSTR5P35346 364 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 DLX6P56179 175 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 MRPS10P82664 201 aaKnown RBP12.48□□□□□ -0.41
ATG4D-211ENST00000589753 PAX8Q06710 450 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 SRSF7Q16629 238 aaKnown RBP eCLIP12.48□□□□□ -0.41
ATG4D-211ENST00000589753 C17orf58Q2M2W7 97 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 METTL11BQ5VVY1 283 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 GPX8Q8TED1 209 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 MAFIPQ8WZ33 124 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 ARL11Q969Q4 196 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 TAF9BQ9HBM6 251 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 RAB9BQ9NP90 201 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 IFT46Q9NQC8 304 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 KPTNQ9Y664 436 aa12.48□□□□□ -0.41
ATG4D-211ENST00000589753 VPS13CQ709C8 3753 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 C17orf98A8MV24 154 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 C15orf65H3BRN8 121 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 GABARAPH6UMI1 98 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 SPINT2O43291 252 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 CD5LO43866 347 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 RBP4P02753 201 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 FOSL1P15407 271 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 KIR2DS4P43632 304 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 HLA-DRB3P79483 266 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF45Q02386 682 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 KIR2DS1Q14954 304 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 HMGN3Q15651 99 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF79Q15937 498 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 PYDC2Q56P42 97 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 RNASE12Q5GAN4 147 aaKnown RBP12.47□□□□□ -0.41
ATG4D-211ENST00000589753 FAHD2BQ6P2I3 314 aaPredicted RBP12.47□□□□□ -0.41
ATG4D-211ENST00000589753 Q6ZS49 121 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 C1orf122Q6ZSJ8 110 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 PRR18Q8N4B5 295 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 C11orf42Q8N5U0 333 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 GVQW1Q8N7I0 195 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 OR52I2Q8NH67 350 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 RFESDQ8TAC1 157 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 FCAMRQ8WWV6 532 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 FAHD2AQ96GK7 314 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 SIRPDQ9H106 197 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 LINC00574Q9H8X3 128 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 ZNF286AQ9HBT8 521 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 AKIP1Q9NQ31 210 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 DSCAML1Q8TD84 2053 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 ABCA2Q9BZC7 2435 aa12.47□□□□□ -0.41
ATG4D-211ENST00000589753 TRDCB7Z8K6 153 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 NPIPB11E5RHQ5 1161 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 J3QLI3 93 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 TOX4O94842 621 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 HBZP02008 142 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 OMGP23515 440 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 DGCR2P98153 550 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 KRTAP1-1Q07627 177 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 PRAMEF5Q5TYX0 476 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 HEPN1Q6WQI6 88 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 HOGA1Q86XE5 327 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 Q8N7P7 452 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 BEST4Q8NFU0 473 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 OR1L1Q8NH94 360 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 UBALD1Q8TB05 177 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 SMIM4Q8WVI0 70 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 S100ZQ8WXG8 99 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 C7orf69Q9H7B7 122 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 METTL8Q9H825 291 aaKnown RBP12.46□□□□□ -0.41
ATG4D-211ENST00000589753 IDI2-AS1Q9NZ38 188 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 KCNS2Q9ULS6 477 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 AUP1Q9Y679 476 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 ITPR3Q14573 2671 aa12.46□□□□□ -0.41
ATG4D-211ENST00000589753 MYO9AB2RTY4 2548 aa12.46□□□□□ -0.42
ATG4D-211ENST00000589753 ARHGAP32A7KAX9 2087 aa12.46□□□□□ -0.42
ATG4D-211ENST00000589753 OTOGQ6ZRI0 2925 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 AKAP9Q99996 3911 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 IGKV1D-8A0A087WSZ0 117 aa12.45□□□□□ -0.42
ATG4D-211ENST00000589753 FABP7O15540 132 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms