RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 FAM71E2Q8N5Q1 922 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 C8orf31Q8N9H6 132 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 OR5M8Q8NGP6 311 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 OR10K1Q8NGX5 313 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 RBMXL1Q96E39 390 aaKnown RBP14.4□□□□□ -0.1
CCDC43-204ENST00000588687 CENPNQ96H22 339 aaPredicted RBP14.4□□□□□ -0.1
CCDC43-204ENST00000588687 PDCD1LG2Q9BQ51 273 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 IMPAD1Q9NX62 359 aa14.4□□□□□ -0.1
CCDC43-204ENST00000588687 SAC3D1A6NKF1 404 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 IGHG4P01861 327 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 ALPLP05186 524 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 ELANEP08246 267 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 GABRB1P18505 474 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 GALEQ14376 348 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 NHLRC3Q5JS37 347 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 SUMF2Q8NBJ7 301 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 TNFAIP8L1Q8WVP5 186 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 C4orf3Q8WVX3 66 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 RTN4IP1Q8WWV3 396 aaPredicted RBP14.39□□□□□ -0.11
CCDC43-204ENST00000588687 ALG8Q9BVK2 526 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 DPCDQ9BVM2 203 aaPredicted RBP14.39□□□□□ -0.11
CCDC43-204ENST00000588687 AASSQ9UDR5 926 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 ZNF580Q9UK33 172 aa14.39□□□□□ -0.11
CCDC43-204ENST00000588687 TMEM212A6NML5 194 aa14.38□□□□□ -0.11
CCDC43-204ENST00000588687 ZNF736B4DX44 427 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-204ENST00000588687 C3orf84H3BNL1 204 aa14.38□□□□□ -0.11
CCDC43-204ENST00000588687 GAPDHP04406 335 aaKnown RBP14.38□□□□□ -0.11
CCDC43-204ENST00000588687 PSMB8P28062 276 aa14.38□□□□□ -0.11
CCDC43-204ENST00000588687 CXorf66Q5JRM2 361 aaPredicted RBP14.38□□□□□ -0.11
CCDC43-204ENST00000588687 ASPHD1Q5U4P2 390 aa14.38□□□□□ -0.11
CCDC43-204ENST00000588687 MEDAGQ5VYS4 303 aa14.38□□□□□ -0.11
CCDC43-204ENST00000588687 MOB3BQ86TA1 216 aa14.38□□□□□ -0.11
CCDC43-204ENST00000588687 OR52M1Q8NGK5 317 aa14.38□□□□□ -0.11
CCDC43-204ENST00000588687 OR2T10Q8NGZ9 312 aa14.38□□□□□ -0.11
CCDC43-204ENST00000588687 S1PR3Q99500 378 aa14.38□□□□□ -0.11
CCDC43-204ENST00000588687 NCBP2LA6PVI3 153 aaKnown RBP14.37□□□□□ -0.11
CCDC43-204ENST00000588687 SEC14L6B5MCN3 397 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 MPZL2O60487 215 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 CD1BP29016 333 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 ECI1P42126 302 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 ZNF137PP52743 207 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 RBM11P57052 281 aaKnown RBP14.37□□□□□ -0.11
CCDC43-204ENST00000588687 LHFPL3Q86UP9 236 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 ZNF439Q8NDP4 499 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 UBALD1Q8TB05 177 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 ASCL2Q99929 193 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 GFOD1Q9NXC2 390 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 IL36GQ9NZH8 169 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 DHDHQ9UQ10 334 aa14.37□□□□□ -0.11
CCDC43-204ENST00000588687 SORL1Q92673 2214 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 SLC31A2O15432 143 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 IGF1P05019 195 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 RAB3AP20336 220 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 CHATP28329 748 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 VHLP40337 213 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 KIAA0141Q14154 515 aaPredicted RBP14.36□□□□□ -0.11
CCDC43-204ENST00000588687 C1orf146Q5VVC0 180 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 OR5AK2Q8NH90 309 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 TSEN15Q8WW01 171 aaKnown RBP14.36□□□□□ -0.11
CCDC43-204ENST00000588687 CPNE2Q96FN4 548 aaPredicted RBP14.36□□□□□ -0.11
CCDC43-204ENST00000588687 GON7Q9BXV9 100 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 ERVK13-1Q9NX77 482 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 TAS2R4Q9NYW5 299 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 ST3GAL6Q9Y274 331 aa14.36□□□□□ -0.11
CCDC43-204ENST00000588687 ZNF256Q9Y2P7 627 aaPredicted RBP14.36□□□□□ -0.11
CCDC43-204ENST00000588687 TMEM30CPA0ZSE6 113 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 SDCBPO00560 298 aaPredicted RBP14.35□□□□□ -0.11
CCDC43-204ENST00000588687 EI24O14681 340 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 GEMIN2O14893 280 aaKnown RBP14.35□□□□□ -0.11
CCDC43-204ENST00000588687 CDRT1O95170 752 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 MOSP00540 346 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 F2RL1P55085 397 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 RSU1Q15404 277 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 KLHL22Q53GT1 634 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 OR8H1Q8NGG4 311 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 JAM3Q9BX67 310 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 FAM192AQ9GZU8 254 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 FAM118AQ9NWS6 357 aa14.35□□□□□ -0.11
CCDC43-204ENST00000588687 IGHV3-43A0A0B4J1X8 118 aa14.34□□□□□ -0.11
CCDC43-204ENST00000588687 RRP9O43818 475 aaKnown RBP14.34□□□□□ -0.11
CCDC43-204ENST00000588687 OR7C1O76099 320 aaPredicted RBP14.34□□□□□ -0.11
CCDC43-204ENST00000588687 RPSAP08865 295 aaKnown RBP14.34□□□□□ -0.11
CCDC43-204ENST00000588687 IGHV3-43DP0DP04 118 aa14.34□□□□□ -0.11
CCDC43-204ENST00000588687 GZMHP20718 246 aa14.34□□□□□ -0.11
CCDC43-204ENST00000588687 Q3ZCU0 254 aa14.34□□□□□ -0.11
CCDC43-204ENST00000588687 XAF1Q6GPH4 301 aa14.34□□□□□ -0.11
CCDC43-204ENST00000588687 ZNF497Q6ZNH5 498 aa14.34□□□□□ -0.11
CCDC43-204ENST00000588687 SLC25A48Q6ZT89 311 aaKnown RBP14.34□□□□□ -0.11
CCDC43-204ENST00000588687 ARL11Q969Q4 196 aa14.34□□□□□ -0.11
CCDC43-204ENST00000588687 KCTD7Q96MP8 289 aa14.34□□□□□ -0.11
CCDC43-204ENST00000588687 GPER1Q99527 375 aa14.34□□□□□ -0.11
CCDC43-204ENST00000588687 SIRT4Q9Y6E7 314 aaPredicted RBP14.34□□□□□ -0.11
CCDC43-204ENST00000588687 HYDINQ4G0P3 5121 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 I3L521 148 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 ORC5O43913 435 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 HTR3BO95264 441 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 PPIFP30405 207 aaKnown RBP14.33□□□□□ -0.12
CCDC43-204ENST00000588687 SOX2P48431 317 aa14.33□□□□□ -0.12
CCDC43-204ENST00000588687 GTF2A1P52655 376 aaPredicted RBP14.33□□□□□ -0.12
CCDC43-204ENST00000588687 ZNF134P52741 427 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 232.8 ms