RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 KCNK2O95069 426 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 RPS17P08708 135 aaKnown RBP4.8□□□□□ -1.64
VMP1-208ENST00000588617 LINC00614P0C842 121 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 NTF3P20783 257 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 GADD45AP24522 165 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 NPY1RP25929 384 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 S100A2P29034 98 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 PPP1R1AQ13522 171 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 ACSM3Q53FZ2 586 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 LINC00483Q53H64 154 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 SPATA31B1PQ5VZV4 182 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 TMEM215Q68D42 235 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 PRSS54Q6PEW0 395 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 VN1R4Q7Z5H5 301 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 DPPA2Q7Z7J5 298 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 Q8N9L7 120 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 OR4C13Q8NGP0 309 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 ZNRF2Q8NHG8 242 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 DERL2Q9GZP9 239 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 OR51B6Q9H340 312 aa4.8□□□□□ -1.64
VMP1-208ENST00000588617 POLA1P09884 1462 aaPredicted RBP4.8□□□□□ -1.64
VMP1-208ENST00000588617 NESP48681 1621 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 ACTBP60709 375 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 ACTG1P63261 375 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 BASP1P80723 227 aaKnown RBP4.79□□□□□ -1.64
VMP1-208ENST00000588617 SCGB1D4Q6XE38 83 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 SLC35G3Q8N808 338 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 OR5K1Q8NHB7 308 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 ITLN2Q8WWU7 325 aaPredicted RBP4.79□□□□□ -1.64
VMP1-208ENST00000588617 FRZBQ92765 325 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 CCDC42Q96M95 316 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 OR51V1Q9H2C8 321 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 VSIRQ9H7M9 311 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 PARVAQ9NVD7 372 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 TMEM216Q9P0N5 145 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 ALG5Q9Y673 324 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 ATRNO75882 1429 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 WDR97A6NE52 1622 aa4.79□□□□□ -1.64
VMP1-208ENST00000588617 URB2Q14146 1524 aaKnown RBP4.78□□□□□ -1.64
VMP1-208ENST00000588617 MRC2Q9UBG0 1479 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 A8MU10 97 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 RPL12P30050 165 aaKnown RBP4.78□□□□□ -1.64
VMP1-208ENST00000588617 NOVP48745 357 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 H2BFSP57053 126 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 LCE1EQ5T753 118 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 HENMT1Q5T8I9 393 aaKnown RBP4.78□□□□□ -1.64
VMP1-208ENST00000588617 TNFAIP8L2Q6P589 184 aaPredicted RBP4.78□□□□□ -1.64
VMP1-208ENST00000588617 ZNF695Q8IW36 515 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 MIR7-3HGQ8N6C7 128 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 Q8N7P7 452 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 TNFAIP8L1Q8WVP5 186 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 CEP162Q5TB80 1403 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 LOXHD1Q8IVV2 1947 aa4.78□□□□□ -1.64
VMP1-208ENST00000588617 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.77□□□□□ -1.65
VMP1-208ENST00000588617 GMNCA6NCL1 334 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 ACOX3O15254 700 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 TRAPPC3O43617 180 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 NRASP01111 189 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 HRASP01112 189 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 KRASP01116 189 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 HBZP02008 142 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 IL4P05112 153 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 OR5AC1P0C628 307 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 GABRA1P14867 456 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 FAM71E1Q6IPT2 247 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 Q6P435 159 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 TCF23Q7RTU1 214 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 COMMD7Q86VX2 200 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 TMEM105Q8N8V8 129 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 SPANXA2-OT1Q8N9U9 137 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 OR8K1Q8NGG5 319 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 OR10D3Q8NH80 312 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 PEBP4Q96S96 227 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 STACQ99469 402 aa4.77□□□□□ -1.65
VMP1-208ENST00000588617 TRIM45Q9H8W5 580 aaPredicted RBP4.77□□□□□ -1.65
VMP1-208ENST00000588617 RAPGEF2Q9Y4G8 1499 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 IGHV1-45A0A0A0MS14 117 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 ZNF850A8MQ14 1090 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 ISLRO14498 428 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 BET1O15155 118 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 DNAH10OSP0CZ25 163 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 CXCL3P19876 107 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 MIPP30301 263 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 IDH2P48735 452 aaKnown RBP4.76□□□□□ -1.65
VMP1-208ENST00000588617 KRTAP10-12P60413 245 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 ZNF816Q0VGE8 651 aaPredicted RBP4.76□□□□□ -1.65
VMP1-208ENST00000588617 FAM104BQ5XKR9 115 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 TIFABQ6ZNK6 161 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 OR8S1Q8NH09 359 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 CDC26Q8NHZ8 85 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 REEP6Q96HR9 211 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 IP6K3Q96PC2 410 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 UBQLN4Q9NRR5 601 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 IL20Q9NYY1 176 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 RAB26Q9ULW5 256 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 SLC22A7Q9Y694 548 aa4.76□□□□□ -1.65
VMP1-208ENST00000588617 POP7O75817 140 aaKnown RBP4.75□□□□□ -1.65
VMP1-208ENST00000588617 RPP14O95059 124 aaKnown RBP4.75□□□□□ -1.65
VMP1-208ENST00000588617 MUC1P15941 1255 aaPredicted RBP4.75□□□□□ -1.65
VMP1-208ENST00000588617 CXCL2P19875 107 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms