RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 RPL22L1Q6P5R6 122 aaKnown RBP13.39□□□□□ -0.27
TMED1-203ENST00000588259 TMPRSS11AQ6ZMR5 421 aa13.39□□□□□ -0.27
TMED1-203ENST00000588259 SLC16A12Q6ZSM3 486 aa13.39□□□□□ -0.27
TMED1-203ENST00000588259 C10orf67Q8IYJ2 551 aa13.39□□□□□ -0.27
TMED1-203ENST00000588259 OR10A7Q8NGE5 316 aa13.39□□□□□ -0.27
TMED1-203ENST00000588259 ARL11Q969Q4 196 aa13.39□□□□□ -0.27
TMED1-203ENST00000588259 SLC29A1Q99808 456 aa13.39□□□□□ -0.27
TMED1-203ENST00000588259 MCRIP2Q9BUT9 160 aaKnown RBP13.39□□□□□ -0.27
TMED1-203ENST00000588259 PAK1IP1Q9NWT1 392 aaPredicted RBP13.39□□□□□ -0.27
TMED1-203ENST00000588259 IGHV3-43A0A0B4J1X8 118 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 IGHV1-3A0A0C4DH29 117 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 GEMIN2O14893 280 aaKnown RBP13.38□□□□□ -0.27
TMED1-203ENST00000588259 IGHV3-43DP0DP04 118 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 GZMHP20718 246 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 IL3RAP26951 378 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 BDKRB2P30411 391 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 PAX5Q02548 391 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 SMN1Q16637 294 aaKnown RBP13.38□□□□□ -0.27
TMED1-203ENST00000588259 SLC22A6Q4U2R8 563 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 OR2G6Q5TZ20 316 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 STX19Q8N4C7 294 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 ZNF555Q8NEP9 628 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 APH1BQ8WW43 257 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 ORAI1Q96D31 301 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 DUX3Q96PT4 197 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.38□□□□□ -0.27
TMED1-203ENST00000588259 DNAH3Q8TD57 4116 aa13.38□□□□□ -0.27
TMED1-203ENST00000588259 AIPO00170 330 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 MYL12AP19105 171 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 ETV1P50549 477 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 ZNF816Q0VGE8 651 aaPredicted RBP13.37□□□□□ -0.27
TMED1-203ENST00000588259 RIPK1Q13546 671 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 CCDC58Q4VC31 144 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 UNQ9370/PRO34162Q6UXP9 181 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 ASCL4Q6XD76 172 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 LINC00596Q86U02 117 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 ZNF695Q8IW36 515 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 STPG2Q8N412 459 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 COMMD1Q8N668 190 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 OR13C5Q8NGS8 318 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 EAF1Q96JC9 268 aaPredicted RBP13.37□□□□□ -0.27
TMED1-203ENST00000588259 ZNF184Q99676 751 aaPredicted RBP13.37□□□□□ -0.27
TMED1-203ENST00000588259 ZFP57Q9NU63 452 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 MRPS18AQ9NVS2 196 aaKnown RBP13.37□□□□□ -0.27
TMED1-203ENST00000588259 IL36GQ9NZH8 169 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 CKLFQ9UBR5 152 aa13.37□□□□□ -0.27
TMED1-203ENST00000588259 COL7A1Q02388 2944 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 AP4M1O00189 453 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 BAG2O95816 211 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 IGHG2P01859 326 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 MYCNOSP40205 109 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 EGFEM1PQ0D2K5 195 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 MPV17LQ2QL34 196 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 NHLRC3Q5JS37 347 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 PQLC1Q8N2U9 271 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 Q8NFD4 153 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 OR2T10Q8NGZ9 312 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 IFT22Q9H7X7 185 aa13.36□□□□□ -0.27
TMED1-203ENST00000588259 FGF20Q9NP95 211 aaPredicted RBP13.36□□□□□ -0.27
TMED1-203ENST00000588259 NBEAL2Q6ZNJ1 2754 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 A0A1W2PP11 408 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 LINC01548A6NM66 108 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 GTF2F2P13984 249 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 DCKP27707 260 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 SLC6A1P30531 599 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 GPR12P47775 334 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 CXorf66Q5JRM2 361 aaPredicted RBP13.35□□□□□ -0.27
TMED1-203ENST00000588259 FAM53AQ6NSI3 398 aaPredicted RBP13.35□□□□□ -0.27
TMED1-203ENST00000588259 TEX38Q6PEX7 206 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 TGIF2LXQ8IUE1 241 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 IZUMO1Q8IYV9 350 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 PRR18Q8N4B5 295 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 JAGN1Q8N5M9 183 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 SMIM19Q96E16 107 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 S100A14Q9HCY8 104 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 GFOD1Q9NXC2 390 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 GNG12Q9UBI6 72 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 TRAPPC2LQ9UL33 140 aa13.35□□□□□ -0.27
TMED1-203ENST00000588259 SIRT4Q9Y6E7 314 aaPredicted RBP13.35□□□□□ -0.27
TMED1-203ENST00000588259 IRGMA1A4Y4 181 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 C15orf65H3BRN8 121 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 CCL24O00175 119 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 ZNF780AO75290 641 aaPredicted RBP13.34□□□□□ -0.27
TMED1-203ENST00000588259 WBP4O75554 376 aaKnown RBP13.34□□□□□ -0.27
TMED1-203ENST00000588259 DEFB136Q30KP8 78 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 LCNL1Q6ZST4 164 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 ZFP41Q8N8Y5 198 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 OR10V1Q8NGI7 309 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 OR52M1Q8NGK5 317 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 RTN4IP1Q8WWV3 396 aaPredicted RBP13.34□□□□□ -0.27
TMED1-203ENST00000588259 TFAP2CQ92754 450 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 MUL1Q969V5 352 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 RASL11BQ9BPW5 248 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 GON7Q9BXV9 100 aa13.34□□□□□ -0.27
TMED1-203ENST00000588259 LIN7CQ9NUP9 197 aaKnown RBP13.34□□□□□ -0.27
TMED1-203ENST00000588259 CHCHD3Q9NX63 227 aaKnown RBP13.34□□□□□ -0.27
TMED1-203ENST00000588259 SMPD3Q9NY59 655 aaPredicted RBP13.34□□□□□ -0.27
TMED1-203ENST00000588259 MAGEA13PA6NCF6 341 aa13.33□□□□□ -0.28
TMED1-203ENST00000588259 MCRIP1C9JLW8 97 aa13.33□□□□□ -0.28
TMED1-203ENST00000588259 SLC31A2O15432 143 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms