RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 DEDD2Q8WXF8 326 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 GSX2Q9BZM3 304 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 BPESC1Q9GZL8 116 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 MMP28Q9H239 520 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 TAF9BQ9HBM6 251 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 BARX1Q9HBU1 254 aaPredicted RBP9.37□□□□□ -0.91
VMP1-207ENST00000588131 EHFQ9NZC4 300 aa9.37□□□□□ -0.91
VMP1-207ENST00000588131 DOPEY2Q9Y3R5 2298 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 UTP20O75691 2785 aaKnown RBP9.36□□□□□ -0.91
VMP1-207ENST00000588131 SPTAN1Q13813 2472 aaKnown RBP9.36□□□□□ -0.91
VMP1-207ENST00000588131 KIR2DS1A0A191URI9 304 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 FAM240BA0A1B0GVZ2 78 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 DISC1C4P0D8 188 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 C12orf77C9JDV5 145 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 F5H0A9 414 aaPredicted RBP9.36□□□□□ -0.91
VMP1-207ENST00000588131 WNT2P09544 360 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 KIR2DS4P43632 304 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 OR3A3P47888 321 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 KIR2DS1Q14954 304 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 TRIM16LQ309B1 348 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 LRRC10Q5BKY1 277 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 OVCH2Q7RTZ1 564 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 PRR18Q8N4B5 295 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 SPICQ8N5J4 248 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 OR13C8Q8NGS7 320 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 OR1L1Q8NH94 360 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 H1FXQ92522 213 aaKnown RBP9.36□□□□□ -0.91
VMP1-207ENST00000588131 MRGPRFQ96AM1 343 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 NEIL1Q96FI4 390 aaPredicted RBP9.36□□□□□ -0.91
VMP1-207ENST00000588131 KIRREL1Q96J84 757 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 DPAGT1Q9H3H5 408 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 NCOR1P1Q9H4R4 102 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 PATZ1Q9HBE1 687 aaKnown RBP9.36□□□□□ -0.91
VMP1-207ENST00000588131 C19orf12Q9NSK7 152 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 NECAP2Q9NVZ3 263 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 MIOXQ9UGB7 285 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 USF3Q68DE3 2245 aa9.36□□□□□ -0.91
VMP1-207ENST00000588131 FUOMA2VDF0 154 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 C15orf65H3BRN8 121 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 IFNA6P05013 189 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 SSTR5P35346 364 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 CR1LQ2VPA4 569 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 SCGB2B2Q4G0G5 96 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 C6orf183Q5T699 404 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 CCBE1Q6UXH8 406 aaPredicted RBP9.35□□□□□ -0.91
VMP1-207ENST00000588131 IDO2Q6ZQW0 420 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 ARRDC1Q8N5I2 433 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 MINDY2Q8NBR6 621 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 DUSP18Q8NEJ0 188 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 OR8B3Q8NGG8 313 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 OR4A4PQ8NGN8 299 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 C10orf105Q8TEF2 133 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 FAM168AQ92567 244 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 UPRTQ96BW1 309 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 LURAP1Q96LR2 239 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 OR8B2Q96RD0 313 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 CABLES2Q9BTV7 478 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 TMPRSS13Q9BYE2 586 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 SLC2A8Q9NY64 477 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 KCNIP1Q9NZI2 227 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 MGAT4AQ9UM21 535 aa9.35□□□□□ -0.91
VMP1-207ENST00000588131 USP9YO00507 2555 aaPredicted RBP9.35□□□□□ -0.91
VMP1-207ENST00000588131 HECTD1Q9ULT8 2610 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 VWC2LB2RUY7 222 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 BET1O15155 118 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 NDUFB6O95139 128 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 HBZP02008 142 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 TCRBP04435 133 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 OR5H8P0DN80 308 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 CGB3P0DN86 165 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 CGB7P0DN87 165 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 TSPAN5P62079 268 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 ZNF273Q14593 569 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 C17orf58Q2M2W7 97 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 DEFB113Q30KQ7 82 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 WDR25Q64LD2 544 aaPredicted RBP9.34□□□□□ -0.91
VMP1-207ENST00000588131 ZNF660Q6AZW8 331 aaPredicted RBP9.34□□□□□ -0.91
VMP1-207ENST00000588131 FAM53AQ6NSI3 398 aaPredicted RBP9.34□□□□□ -0.91
VMP1-207ENST00000588131 TRAT1Q6PIZ9 186 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 CLEC2AQ6UVW9 174 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 NLRC3Q7RTR2 1065 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 LHFPL1Q86WI0 220 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 CLDND2Q8NHS1 167 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 RFESDQ8TAC1 157 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 IL1F10Q8WWZ1 152 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 ARL11Q969Q4 196 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 PRRT1Q99946 306 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 ZNF2Q9BSG1 426 aaPredicted RBP9.34□□□□□ -0.91
VMP1-207ENST00000588131 PIMREGQ9BSJ6 248 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 BEX4Q9NWD9 120 aaPredicted RBP9.34□□□□□ -0.91
VMP1-207ENST00000588131 OR6C3Q9NZP0 311 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 OR1A1Q9P1Q5 309 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 PCDHB10Q9UN67 800 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 FLVCR2Q9UPI3 526 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 LRBAP50851 2863 aa9.34□□□□□ -0.91
VMP1-207ENST00000588131 DSCAML1Q8TD84 2053 aa9.33□□□□□ -0.92
VMP1-207ENST00000588131 TRAV6A0A075B6T7 132 aa9.33□□□□□ -0.92
VMP1-207ENST00000588131 IGHV4-30-2A0A087WSY4 118 aa9.33□□□□□ -0.92
VMP1-207ENST00000588131 TRGV10A0A0A0MS01 117 aa9.33□□□□□ -0.92
VMP1-207ENST00000588131 TRBV6-7A0A0A0MS04 114 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms