RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 RPEQ96AT9 228 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 DERL3Q96Q80 235 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 LINC00574Q9H8X3 128 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 LIN7BQ9HAP6 207 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 VCX3AQ9NNX9 186 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 RAB9BQ9NP90 201 aa9.95□□□□□ -0.82
SS18-225ENST00000585121 MEGF8Q7Z7M0 2845 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 DPPA5A6NC42 116 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 MCRIP1C9JLW8 97 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 J3QR06 171 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 JUNBP17275 347 aaPredicted RBP9.94□□□□□ -0.82
SS18-225ENST00000585121 PRSS48Q7RTY5 328 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 SPARTQ8N0X7 666 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 C11orf44Q8N8P7 122 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 OR10X1Q8NGY0 326 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 TOMM40LQ969M1 308 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 UQCC2Q9BRT2 126 aa9.94□□□□□ -0.82
SS18-225ENST00000585121 NPIPB11E5RHQ5 1161 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 RGS10O43665 173 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 FBXO24O75426 580 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 CRTAPO75718 401 aaPredicted RBP9.93□□□□□ -0.82
SS18-225ENST00000585121 FAM106CPP0CH98 169 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 ALDH3B2P48448 385 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 MADCAM1Q13477 382 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 HABP2Q14520 560 aaPredicted RBP9.93□□□□□ -0.82
SS18-225ENST00000585121 SPHARQ15513 63 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 ACSM3Q53FZ2 586 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 SVOPQ8N4V2 548 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 ARL11Q969Q4 196 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 SLC25A33Q9BSK2 321 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 SERTAD4Q9NUC0 356 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 GHRLQ9UBU3 117 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 PSG11Q9UQ72 335 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 VWFP04275 2813 aa9.93□□□□□ -0.82
SS18-225ENST00000585121 SMIM31A0A1B0GVY4 71 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 A0A1W2PP11 408 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A10PA6NDY2 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A18PA6NE21 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A16PA6NEW6 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A20PA6NIJ5 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A7PA6NKC0 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A12PA8MX19 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A5PA8MXJ8 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A23PA8MXZ1 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 LY6LH3BQJ8 138 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 M0QZK8 103 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 AIPO00170 330 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 OR2F2O95006 317 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 TSPAN15O95858 294 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 IGHV3-7P01780 117 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A15PP0C7V4 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A13PP0C7W8 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A14PP0C7W9 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 FAM90A24PP0C7X0 464 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 CD24P25063 80 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 SSTR5P35346 364 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 RAB7AP51149 207 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 BLCAPP62952 87 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 GPR50Q13585 617 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 MED22Q15528 200 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 GLT8D1Q68CQ7 371 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 CCDC107Q8WV48 283 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 CFHR4Q92496 578 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 LEAP2Q969E1 77 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 RBM14Q96PK6 669 aaKnown RBP9.92□□□□□ -0.82
SS18-225ENST00000585121 OR5M11Q96RB7 305 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 TMED9Q9BVK6 235 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 SELENOIQ9C0D9 397 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 ETAA1Q9NY74 926 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 ZNF581Q9P0T4 197 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 TRAV39A0A0B4J263 110 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 SDCBPO00560 298 aaPredicted RBP9.92□□□□□ -0.82
SS18-225ENST00000585121 PIN1P1O15428 100 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 SPINT2O43291 252 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 ORC5O43913 435 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 MT-ND4P03905 459 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 GLAP06280 429 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 UBBP0CG47 229 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 MGMTP16455 207 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 GNG10P50151 68 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 DEFA6Q01524 100 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 EMX1Q04741 257 aaPredicted RBP9.92□□□□□ -0.82
SS18-225ENST00000585121 C6orf183Q5T699 404 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 RAB12Q6IQ22 244 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 ZNF497Q6ZNH5 498 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 THNSL2Q86YJ6 484 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 OR52M1Q8NGK5 317 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 UFD1Q92890 307 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 CCDC90BQ9GZT6 254 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 CST11Q9H112 138 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 BANF2Q9H503 90 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 TRAPPC2LQ9UL33 140 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 PEX16Q9Y5Y5 336 aa9.92□□□□□ -0.82
SS18-225ENST00000585121 CA11O75493 328 aa9.91□□□□□ -0.82
SS18-225ENST00000585121 FUT3P21217 361 aa9.91□□□□□ -0.82
SS18-225ENST00000585121 IL3RAP26951 378 aa9.91□□□□□ -0.82
SS18-225ENST00000585121 HES1Q14469 280 aa9.91□□□□□ -0.82
SS18-225ENST00000585121 NSUN5P1Q3KNT7 163 aa9.91□□□□□ -0.82
SS18-225ENST00000585121 ABCA11PQ4W5N1 156 aa9.91□□□□□ -0.82
SS18-225ENST00000585121 HSD17B12Q53GQ0 312 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms