RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 MTORP42345 2549 aa1.71□□□□□ -2.14
VAPA-206ENST00000583475 TLN2Q9Y4G6 2542 aa1.71□□□□□ -2.14
VAPA-206ENST00000583475 NSD1Q96L73 2696 aaPredicted RBP1.71□□□□□ -2.14
VAPA-206ENST00000583475 CCDC168Q8NDH2 2452 aa1.71□□□□□ -2.14
VAPA-206ENST00000583475 ANKRD17O75179 2603 aaKnown RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 ACANP16112 2415 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 A0A0G2JMM0 328 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 A0A1B0GX78 115 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 A0A1W2PPB8 328 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 A0A1W2PRS3 328 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 RAB19A4D1S5 217 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 GABRR3A8MPY1 467 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 KIR3DP1A8MWS1 328 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 C2orf74A8MZ97 194 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 TMEM114B3SHH9 223 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 E5RI56 91 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 DYNC1I1O14576 645 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 COPEO14579 308 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 BIRC5O15392 142 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 RRP8O43159 456 aaKnown RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 ATP8B1O43520 1251 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 RAD1O60671 282 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 GCM2O75603 506 aaPredicted RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 CRTAPO75718 401 aaPredicted RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 CST1P01037 141 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 IGKV1D-16P01601 117 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 SERPINE1P05121 402 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 CRYGBP07316 175 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 SERPINA6P08185 405 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 ANXA5P08758 320 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 RBP1P09455 135 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 LIPCP11150 499 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 FLNAP21333 2647 aaKnown RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 HIST1H1TP22492 207 aaPredicted RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 CCNOP22674 350 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 GTF2E2P29084 291 aaKnown RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 HMOX2P30519 316 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 OTX1P32242 354 aaPredicted RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 HTR2BP41595 481 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 CDKN2CP42773 168 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 RPS5P46782 204 aaKnown RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 RFX3P48380 749 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 VSX2P58304 361 aaPredicted RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 RAB8AP61006 207 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 RPS15AP62244 130 aaKnown RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 CACNA1DQ01668 2161 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 LOXL1Q08397 574 aaPredicted RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 ERCC8Q13216 396 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 EIF3IQ13347 325 aaKnown RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 FAM53BQ14153 422 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 GPR176Q14439 515 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 NCF4Q15080 339 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 ALKBH6Q3KRA9 238 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 CCDC153Q494R4 210 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 DEFB134Q4QY38 66 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 H3F3CQ6NXT2 135 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 TTC23LQ6PF05 361 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 EPGNQ6UW88 154 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 NPSR1Q6W5P4 371 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 LRRC34Q8IZ02 419 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 FAM58AQ8N1B3 248 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 KRTCAP2Q8N6L1 136 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 NECAP1Q8NC96 275 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 TMEM104Q8NE00 496 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 OR11G2Q8NGC1 345 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 NDNFQ8TB73 568 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 TWIST2Q8WVJ9 160 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 CDKL2Q92772 493 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 RAB1CQ92928 201 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.7□□□□□ -2.14
VAPA-206ENST00000583475 C8orf44Q96CB5 159 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 TM4SF18Q96CE8 201 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 C10orf35Q96D05 121 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 SELENOSQ9BQE4 189 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 WFDC6Q9BQY6 131 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 EFCAB11Q9BUY7 163 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 ANKRD60Q9BZ19 345 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 NDEL1Q9GZM8 345 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 GAL3ST2Q9H3Q3 398 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 WDR55Q9H6Y2 383 aaPredicted RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 NIPAL2Q9H841 368 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 HMG20AQ9NP66 347 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 MRPS30Q9NP92 439 aaKnown RBP1.7□□□□□ -2.14
VAPA-206ENST00000583475 CCNB1IP1Q9NPC3 277 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 FGFR1OP2Q9NVK5 253 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 TAS2R7Q9NYW3 318 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 MTCH1Q9NZJ7 389 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 RAB23Q9ULC3 237 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 FLVCR2Q9UPI3 526 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 CUBNO60494 3623 aa1.7□□□□□ -2.14
VAPA-206ENST00000583475 ARFGEF3Q5TH69 2177 aa1.69□□□□□ -2.14
VAPA-206ENST00000583475 HIVEP1P15822 2718 aa1.69□□□□□ -2.14
VAPA-206ENST00000583475 DSPPQ9NZW4 1301 aa1.69□□□□□ -2.14
VAPA-206ENST00000583475 CREBBPQ92793 2442 aa1.69□□□□□ -2.14
VAPA-206ENST00000583475 IGHV1-45A0A0A0MS14 117 aa1.69□□□□□ -2.14
VAPA-206ENST00000583475 IGHV3-74A0A0B4J1X5 117 aa1.69□□□□□ -2.14
VAPA-206ENST00000583475 GOLGA8QA0A0J9YX86 632 aa1.69□□□□□ -2.14
VAPA-206ENST00000583475 TRBV11-1A0A0K0K1C0 115 aa1.69□□□□□ -2.14
VAPA-206ENST00000583475 A0A1B0GUH1 482 aa1.69□□□□□ -2.14
VAPA-206ENST00000583475 SYCE1LA8MT33 242 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms