RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 JPT1Q9UK76 154 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 SSX5O60225 188 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 KLF7O75840 302 aaPredicted RBP5.05□□□□□ -1.6
RTTN-209ENST00000583043 CA6P23280 308 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 MAGEA5P43359 124 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 TUSC1Q2TAM9 212 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 VMA21Q3ZAQ7 101 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 NCR3LG1Q68D85 454 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 PRR18Q8N4B5 295 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 PAQR4Q8N4S7 273 aaPredicted RBP5.05□□□□□ -1.6
RTTN-209ENST00000583043 TMEM252Q8N6L7 170 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 STXBP6Q8NFX7 210 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 S100PBPQ96BU1 408 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 FBXO17Q96EF6 278 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 SNX22Q96L94 193 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 SSUH2Q9Y2M2 353 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 MAP1LC3B2A6NCE7 125 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 DBX1A6NMT0 343 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 K7EQM0 130 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 GALR2O43603 387 aaPredicted RBP5.05□□□□□ -1.6
RTTN-209ENST00000583043 PLAC9Q5JTB6 97 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 SPANXN5Q5MJ07 72 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 LY6G6FQ5SQ64 297 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 TMEM217Q8N7C4 229 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 BMPERQ8N8U9 685 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 MAP1LC3BQ9GZQ8 125 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 CACNG5Q9UF02 275 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 SEC14L6B5MCN3 397 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 SP9P0CG40 484 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 ZNF250P15622 560 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 NQO2P16083 231 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 RAB5AP20339 215 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 PAX6P26367 422 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 ID4P47928 161 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 RHOBP62745 196 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 SRSF5Q13243 272 aaKnown RBP5.05□□□□□ -1.6
RTTN-209ENST00000583043 TMEM241Q24JQ0 296 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 ANKRD55Q3KP44 614 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 OR10S1Q8NGN2 331 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 NABP1Q96AH0 204 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 SMIM7Q9BQ49 75 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 SRXN1Q9BYN0 137 aa5.05□□□□□ -1.6
RTTN-209ENST00000583043 TRAV38-1A0A0B4J264 116 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 RBFOX2O43251 390 aaKnown RBP eCLIP5.04□□□□□ -1.6
RTTN-209ENST00000583043 SOX8P57073 446 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 Q6ZT83 130 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 ZNF645Q8N7E2 425 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 ABHD3Q8WU67 409 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 RTBDNQ9BSG5 229 aaPredicted RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 PARD6GQ9BYG4 376 aaPredicted RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 KCNK15Q9H427 330 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 RNF7Q9UBF6 113 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 ZDHHC8Q9ULC8 765 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 AMMECR1Q9Y4X0 333 aaPredicted RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 MYO7AQ13402 2215 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 SPP1P10451 314 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 SPCS3P61009 180 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 SELENOHQ8IZQ5 122 aaKnown RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 SDSLQ96GA7 329 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 COMMD5Q9GZQ3 224 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 NCOR1P1Q9H4R4 102 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 MYOFQ9NZM1 2061 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 FAM24AA6NFZ4 105 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 GFRA3O60609 400 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 SS18L1O75177 396 aaPredicted RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 CLDN14O95500 239 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 UCP2P55851 309 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 LRRC10Q5BKY1 277 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 OR1L6Q8NGR2 347 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 BCL2L2Q92843 193 aaPredicted RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 PNRC2Q9NPJ4 139 aaKnown RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 CISD1Q9NZ45 108 aaKnown RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 RCC2Q9P258 522 aaKnown RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 PPP1R3CQ9UQK1 317 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 A0A087WWC5 75 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 TRAV14DV4A0A0A6YYC5 116 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 TMEM250H0YL14 139 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 MASP2O00187 686 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 IGHV3-9P01782 118 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 RANP62826 216 aaKnown RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 SPINK14Q6IE38 97 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 WDR73Q6P4I2 378 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 BOLLQ8N9W6 283 aaKnown RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 SUMF1Q8NBK3 374 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 OR1L4Q8NGR5 311 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 SOX7Q9BT81 388 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 CABLES2Q9BTV7 478 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 SEBOXQ9HB31 216 aaPredicted RBP5.04□□□□□ -1.6
RTTN-209ENST00000583043 ELOVL5Q9NYP7 299 aa5.04□□□□□ -1.6
RTTN-209ENST00000583043 TIAF1O95411 115 aa5.03□□□□□ -1.6
RTTN-209ENST00000583043 FBP1P09467 338 aa5.03□□□□□ -1.6
RTTN-209ENST00000583043 WNT2P09544 360 aa5.03□□□□□ -1.6
RTTN-209ENST00000583043 CTRB1P17538 263 aa5.03□□□□□ -1.6
RTTN-209ENST00000583043 RPL35P42766 123 aaKnown RBP5.03□□□□□ -1.6
RTTN-209ENST00000583043 Q5BKY6 102 aa5.03□□□□□ -1.6
RTTN-209ENST00000583043 CTRB2Q6GPI1 263 aa5.03□□□□□ -1.6
RTTN-209ENST00000583043 LYZL2Q7Z4W2 148 aa5.03□□□□□ -1.6
RTTN-209ENST00000583043 MDP1Q86V88 176 aa5.03□□□□□ -1.6
RTTN-209ENST00000583043 LRRC29Q8WV35 223 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms