RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 HEPN1Q6WQI6 88 aa10.76□□□□□ -0.69
SS18-222ENST00000582792 ASCL4Q6XD76 172 aa10.76□□□□□ -0.69
SS18-222ENST00000582792 RNF144BQ7Z419 303 aa10.76□□□□□ -0.69
SS18-222ENST00000582792 NKAIN3Q8N8D7 197 aa10.76□□□□□ -0.69
SS18-222ENST00000582792 OR51A2Q8NGJ7 313 aa10.76□□□□□ -0.69
SS18-222ENST00000582792 GAL3ST2Q9H3Q3 398 aa10.76□□□□□ -0.69
SS18-222ENST00000582792 ZMAT5Q9UDW3 170 aaKnown RBP10.76□□□□□ -0.69
SS18-222ENST00000582792 TRAV8-7A0A075B6U6 113 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 PSMB11A5LHX3 300 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 MAGEA13PA6NCF6 341 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 GABRPO00591 440 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 KDM4BO94953 1096 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 SRMP19623 302 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 CDK2P24941 298 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 CD34P28906 385 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 FGF9P31371 208 aaPredicted RBP10.75□□□□□ -0.69
SS18-222ENST00000582792 ZNF93P35789 620 aaPredicted RBP10.75□□□□□ -0.69
SS18-222ENST00000582792 CEACAM3P40198 252 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 OR3A1P47881 315 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 POU3F4P49335 361 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 GP2P55259 537 aaKnown RBP10.75□□□□□ -0.69
SS18-222ENST00000582792 RPL23AP62750 156 aaKnown RBP10.75□□□□□ -0.69
SS18-222ENST00000582792 FABP5Q01469 135 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 ZNF146Q15072 292 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 NEDD8Q15843 81 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 C9orf152Q5JTZ5 239 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 DDI2Q5TDH0 399 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 LYPD6Q86Y78 171 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 Q8NFD4 153 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 TMEM203Q969S6 136 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 CREB3L1Q96BA8 519 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 UQCC2Q9BRT2 126 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 RBFOX1Q9NWB1 397 aaKnown RBP10.75□□□□□ -0.69
SS18-222ENST00000582792 IL36GQ9NZH8 169 aa10.75□□□□□ -0.69
SS18-222ENST00000582792 TRGV10A0A0A0MS01 117 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 TRAV1-2A0A0B4J238 106 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 A0A1W2PPK0 400 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 FAM172BPA6NC97 362 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 BUB1B-PAK6H3BSN5 160 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 DUSP1P28562 367 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 SLC6A1P30531 599 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 MYCNOSP40205 109 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 PTGFRP43088 359 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 NPBWR2P48146 333 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 PSMD7P51665 324 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 DGCR2P98153 550 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 INSL4Q14641 139 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 HLA-DRB5Q30154 266 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 TPTE2P1Q5T6R2 138 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 ELP2Q6IA86 826 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 OR2W3Q7Z3T1 314 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 ZNF329Q86UD4 541 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 LRRTM1Q86UE6 522 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 FAM58AQ8N1B3 248 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 CORO2AQ92828 525 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 SPACA5Q96QH8 159 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 GPER1Q99527 375 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 P2RX4Q99571 388 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 MRPS26Q9BYN8 205 aaKnown RBP10.74□□□□□ -0.69
SS18-222ENST00000582792 ZNF286AQ9HBT8 521 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 PCDHB16Q9NRJ7 776 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 TAS2R3Q9NYW6 316 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 GLS2Q9UI32 602 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 STUB1Q9UNE7 303 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 MOB4Q9Y3A3 225 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 U3KQK5 164 aa10.74□□□□□ -0.69
SS18-222ENST00000582792 IGKV1-12A0A0C4DH73 117 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 OOSP1A8MZH6 123 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 LY6LH3BQJ8 138 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 TOR1AO14656 332 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 ZNF780AO75290 641 aaPredicted RBP10.73□□□□□ -0.69
SS18-222ENST00000582792 IGKV1D-12P01611 117 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 SMIM18P0DKX4 95 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 TMEM225BP0DP42 221 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 BCL3P20749 454 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 GDNFP39905 211 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 MNDAP41218 407 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 MTNR1BP49286 362 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 TIMM50Q3ZCQ8 353 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 SPIN3Q5JUX0 258 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 GLT8D1Q68CQ7 371 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 CCDC144NLQ6NUI1 221 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 C18orf65Q6ZTR6 163 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 C8orf86Q6ZUL3 223 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 SATL1Q86VE3 508 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 TNFAIP8L1Q8WVP5 186 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 RFT1Q96AA3 541 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 ORAI1Q96D31 301 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 PPIL3Q9H2H8 161 aaKnown RBP10.73□□□□□ -0.69
SS18-222ENST00000582792 HMG20AQ9NP66 347 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 ZFP57Q9NU63 452 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 GHRLQ9UBU3 117 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 SSR3Q9UNL2 185 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 GSTK1Q9Y2Q3 226 aa10.73□□□□□ -0.69
SS18-222ENST00000582792 A0A087X0M5 115 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 A0A1B0GX30 115 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FUOMA2VDF0 154 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM90A18PA6NE21 464 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM90A16PA6NEW6 464 aa10.72□□□□□ -0.69
SS18-222ENST00000582792 FAM90A20PA6NIJ5 464 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms