RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 Q6ZR03 302 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 MOGAT3Q86VF5 341 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 FAM90A1Q86YD7 464 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 ZNF295-AS1Q8N0V1 137 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 OR5M8Q8NGP6 311 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 GRPEL2Q8TAA5 225 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 MRPL30Q8TCC3 161 aaKnown RBP7.84□□□□□ -1.15
SS18-220ENST00000582092 SECTM1Q8WVN6 248 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 ITLN1Q8WWA0 313 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 IL1F10Q8WWZ1 152 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 ERGIC1Q969X5 290 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 MOB3AQ96BX8 217 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 MEGF10Q96KG7 1140 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 WFIKKN1Q96NZ8 548 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 RTBDNQ9BSG5 229 aaPredicted RBP7.84□□□□□ -1.15
SS18-220ENST00000582092 GON7Q9BXV9 100 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 MRPL37Q9BZE1 423 aaKnown RBP7.84□□□□□ -1.15
SS18-220ENST00000582092 FXYD6Q9H0Q3 95 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 DNTTIP1Q9H147 329 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 TLNRD1Q9H1K6 362 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 C5orf66Q9H5L9 145 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 RAB9BQ9NP90 201 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 DYNLRB1Q9NP97 96 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 CA10Q9NS85 328 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 RNF7Q9UBF6 113 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 IL19Q9UHD0 177 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 SHPKQ9UHJ6 478 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 ITGB1BP2Q9UKP3 347 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 WIPI2Q9Y4P8 454 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 ITPR2Q14571 2701 aa7.84□□□□□ -1.15
SS18-220ENST00000582092 ANKHD1Q8IWZ3 2542 aaKnown RBP7.83□□□□□ -1.16
SS18-220ENST00000582092 IGLV3-9A0A075B6K5 115 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 DPRXA6NFQ7 191 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 OOEPA6NGQ2 149 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 ZSCAN5BA6NJL1 495 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 RFPL4AA6NLU0 287 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 RFPL4AL1F8VTS6 287 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 WNT9BO14905 357 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 RLN2P04090 185 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 SCTP09683 121 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 OR4A8P0C604 315 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 PRDX2P32119 198 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 SERPINF1P36955 418 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 SRPXP78539 464 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 COL10A1Q03692 680 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 SMCO1Q147U7 214 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 ATXN7L3Q14CW9 347 aaPredicted RBP7.83□□□□□ -1.16
SS18-220ENST00000582092 NDUFA5Q16718 116 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 PHLDA2Q53GA4 152 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 IGSF11Q5DX21 431 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 SHEQ5VZ18 495 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 SLC35E4Q6ICL7 350 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 TRAT1Q6PIZ9 186 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 ZNF497Q6ZNH5 498 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 C11orf53Q8IXP5 236 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 PRR18Q8N4B5 295 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 INO80EQ8NBZ0 244 aaPredicted RBP7.83□□□□□ -1.16
SS18-220ENST00000582092 OR5D13Q8NGL4 314 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 LILRB1Q8NHL6 650 aaPredicted RBP7.83□□□□□ -1.16
SS18-220ENST00000582092 RTN4IP1Q8WWV3 396 aaPredicted RBP7.83□□□□□ -1.16
SS18-220ENST00000582092 GALMQ96C23 342 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 PLPPR2Q96GM1 343 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 SEC22AQ96IW7 307 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 SUCNR1Q9BXA5 334 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 HES4Q9HCC6 221 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 RAB18Q9NP72 206 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 UBE2J1Q9Y385 318 aaPredicted RBP7.83□□□□□ -1.16
SS18-220ENST00000582092 BOLA1Q9Y3E2 137 aa7.83□□□□□ -1.16
SS18-220ENST00000582092 CRYM-AS1A6NIL9 109 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 M0R233 179 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 GPR31O00270 319 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 CCSO14618 274 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 SPINT2O43291 252 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 HOXB5P09067 269 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 PET100P0DJ07 73 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 HLA-GP17693 338 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 CCKARP32238 428 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 CFHR2P36980 270 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 LUMP51884 338 aaPredicted RBP7.82□□□□□ -1.16
SS18-220ENST00000582092 SNRPD2P62316 118 aaKnown RBP7.82□□□□□ -1.16
SS18-220ENST00000582092 KRBOX4Q5JUW0 171 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 ADAM5Q6NVV9 412 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 ZNF546Q86UE3 836 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 C1orf87Q8N0U7 546 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 LGI3Q8N145 548 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 OR8H1Q8NGG4 311 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 MRGPRFQ96AM1 343 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 MS4A5Q9H3V2 200 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 NAA60Q9H7X0 242 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 ZC4H2Q9NQZ6 224 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 GSKIPQ9P0R6 139 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 OPN4Q9UHM6 478 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 PPP1R3CQ9UQK1 317 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 ABCA12Q86UK0 2595 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 CELSR2Q9HCU4 2923 aa7.82□□□□□ -1.16
SS18-220ENST00000582092 ANKRD17O75179 2603 aaKnown RBP7.82□□□□□ -1.16
SS18-220ENST00000582092 ABCA4P78363 2273 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 A0A1B0GWJ7 208 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 NKX6-3A6NJ46 265 aa7.81□□□□□ -1.16
SS18-220ENST00000582092 A6NNC1 897 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms