RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 ABCA1O95477 2261 aa11.79□□□□□ -0.52
SKA2-205ENST00000580541 DSCAML1Q8TD84 2053 aa11.79□□□□□ -0.52
SKA2-205ENST00000580541 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.78□□□□□ -0.526e-8■■■□□ 16
SKA2-205ENST00000580541 CR1P17927 2039 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 KBTBD11-OT1A0A1B0GTJ5 212 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 C22orf46C9J442 243 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 CTDSPLO15194 276 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 FCN3O75636 299 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 RBBP9O75884 186 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 LPLP06858 475 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 FAHD2BQ6P2I3 314 aaPredicted RBP11.78□□□□□ -0.52
SKA2-205ENST00000580541 CCDC190Q86UF4 302 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 CIARTQ8N365 385 aaPredicted RBP11.78□□□□□ -0.52
SKA2-205ENST00000580541 FGFRL1Q8N441 504 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 DTX3Q8N9I9 347 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 MRPL30Q8TCC3 161 aaKnown RBP11.78□□□□□ -0.52
SKA2-205ENST00000580541 MRGPRDQ8TDS7 321 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 ARL11Q969Q4 196 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 GALMQ96C23 342 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 FAHD2AQ96GK7 314 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 ST6GALNAC5Q9BVH7 336 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 METTL8Q9H825 291 aaKnown RBP11.78□□□□□ -0.52
SKA2-205ENST00000580541 ZNF286AQ9HBT8 521 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 Q9N2K0 584 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 KCNS2Q9ULS6 477 aa11.78□□□□□ -0.52
SKA2-205ENST00000580541 ARHGAP32A7KAX9 2087 aa11.77□□□□□ -0.52
SKA2-205ENST00000580541 TRDCB7Z8K6 153 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 GABARAPH6UMI1 98 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 CD5LO43866 347 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 FCGR3AP08637 254 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 CTXN2P0C2S0 81 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 ERVFRD-1P60508 538 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 ACTBP60709 375 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 ARF6P62330 175 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 ACTG1P63261 375 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 PAX2Q02962 417 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 SSBP1Q04837 148 aaKnown RBP11.77□□□□□ -0.53
SKA2-205ENST00000580541 PAX8Q06710 450 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 PYDC2Q56P42 97 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 OLFML2AQ68BL7 652 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 ZNF880Q6PDB4 577 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 HEPN1Q6WQI6 88 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 Q6ZS49 121 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 DYRK2Q92630 601 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 SOSTQ9BQB4 213 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 TMUB1Q9BVT8 246 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 C7orf69Q9H7B7 122 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 HEXA-AS1Q9H8Q6 139 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 LINC00574Q9H8X3 128 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 TAF9BQ9HBM6 251 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 MMP26Q9NRE1 261 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 TAS2R8Q9NYW2 309 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 AUP1Q9Y679 476 aa11.77□□□□□ -0.53
SKA2-205ENST00000580541 C17orf98A8MV24 154 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 TOX4O94842 621 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 DIRAS3O95661 229 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 RCC1P18754 421 aaPredicted RBP11.76□□□□□ -0.53
SKA2-205ENST00000580541 NCR3LG1Q68D85 454 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 OR52M1Q8NGK5 317 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 OR4A4PQ8NGN8 299 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 OR13A1Q8NGR1 328 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 NUDCD2Q8WVJ2 157 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 DACT3Q96B18 629 aaPredicted RBP11.76□□□□□ -0.53
SKA2-205ENST00000580541 ABHD1Q96SE0 405 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 CALYQ9NYX4 217 aa11.76□□□□□ -0.53
SKA2-205ENST00000580541 SETXQ7Z333 2677 aaKnown RBP11.75□□□□□ -0.53
SKA2-205ENST00000580541 CSMD1Q96PZ7 3565 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 NPIPB11E5RHQ5 1161 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 RGS11O94810 467 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 GSTT2BP0CG30 244 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 CGB3P0DN86 165 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 CGB7P0DN87 165 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 PRTN3P24158 256 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 FPR2P25090 351 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 HTD2P86397 168 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 ZNF273Q14593 569 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 CHRFAM7AQ494W8 412 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 STEAP3Q658P3 488 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 HOGA1Q86XE5 327 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 GDPD1Q8N9F7 314 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 BEST4Q8NFU0 473 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 OR13D1Q8NGV5 346 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 GPX8Q8TED1 209 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 HDHD3Q9BSH5 251 aaPredicted RBP11.75□□□□□ -0.53
SKA2-205ENST00000580541 UNKLQ9H9P5 680 aaKnown RBP11.75□□□□□ -0.53
SKA2-205ENST00000580541 IDI2-AS1Q9NZ38 188 aa11.75□□□□□ -0.53
SKA2-205ENST00000580541 ZNF107Q9UII5 783 aaPredicted RBP11.75□□□□□ -0.53
SKA2-205ENST00000580541 C12orf77C9JDV5 145 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 FABP7O15540 132 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 HSPA12AO43301 675 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 GSTZ1O43708 216 aaPredicted RBP11.74□□□□□ -0.53
SKA2-205ENST00000580541 SSX5O60225 188 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 HBZP02008 142 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 IGHV1-8P0DP01 117 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 CCL3L1P16619 93 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 ZBTB25P24278 435 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 RCVRNP35243 200 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 OR3A3P47888 321 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 TAS2R46P59540 309 aa11.74□□□□□ -0.53
SKA2-205ENST00000580541 ARPC4P59998 168 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms