RNA–Protein interactions for RNA: ENST00000580061.5

CSNK1D-212, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-212ENST00000580061 ZNF728P0DKX0 622 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 ZNF16P17020 682 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 GZMHP20718 246 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 DVL1P1P54792 670 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 DLX6P56179 175 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 C17orf58Q2M2W7 97 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 C6orf183Q5T699 404 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 TRAT1Q6PIZ9 186 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 BTNL3Q6UXE8 466 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 MOB1BQ7L9L4 216 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 GLCCI1Q86VQ1 547 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 KIR3DL3Q8N743 410 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 SETD6Q8TBK2 473 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 TMUB1Q9BVT8 246 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 SCPEP1Q9HB40 452 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 HIF1ANQ9NWT6 349 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 OPN4Q9UHM6 478 aa13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 ZNF230Q9UIE0 474 aaPredicted RBP13.08□□□□□ -0.32
CSNK1D-212ENST00000580061 MEIS3P1A6NDR6 274 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 C17orf98A8MV24 154 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 C12orf77C9JDV5 145 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 C15orf65H3BRN8 121 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 SULT1C2O00338 296 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 CTDSPLO15194 276 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 ORC5O43913 435 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 INHBBP09529 407 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 GATA3P23771 443 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 PTBP1P26599 531 aaKnown RBP eCLIP13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 SSTR5P35346 364 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 ARF6P62330 175 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 MRPS10P82664 201 aaKnown RBP13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 PAX8Q06710 450 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 KRTAP1-1Q07627 177 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 ZNF79Q15937 498 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 SRSF7Q16629 238 aaKnown RBP eCLIP13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 DCAF12L2Q5VW00 463 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 ZNF554Q86TJ5 538 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 C11orf42Q8N5U0 333 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 GPX8Q8TED1 209 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 OCSTAMPQ9BR26 566 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 GAL3ST2Q9H3Q3 398 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 LINC00574Q9H8X3 128 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 TAF9BQ9HBM6 251 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 CALYQ9NYX4 217 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 ONECUT1Q9UBC0 465 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 MGAT4AQ9UM21 535 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 KPTNQ9Y664 436 aa13.07□□□□□ -0.32
CSNK1D-212ENST00000580061 KBTBD11-OT1A0A1B0GTJ5 212 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 NPIPB11E5RHQ5 1161 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 GABARAPH6UMI1 98 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 M0R1W7 72 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 LPLP06858 475 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 CD99P14209 185 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 CBX5P45973 191 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 HMGN3Q15651 99 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 Q6ZS49 121 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 C5orf24Q7Z6I8 188 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 GVQW1Q8N7I0 195 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 Q8N7P7 452 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 MAFIPQ8WZ33 124 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 ARL11Q969Q4 196 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 ST6GALNAC5Q9BVH7 336 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 AKIP1Q9NQ31 210 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 KCNIP1Q9NZI2 227 aa13.06□□□□□ -0.32
CSNK1D-212ENST00000580061 CD5LO43866 347 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 RBP4P02753 201 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 MMP9P14780 707 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 FOSL1P15407 271 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 ERVFRD-1P60508 538 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 HLA-DRB3P79483 266 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 ZNF45Q02386 682 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 RNASE12Q5GAN4 147 aaKnown RBP13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 C1orf122Q6ZSJ8 110 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 HOGA1Q86XE5 327 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 MFSD4AQ8N468 514 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 OR52I2Q8NH67 350 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 UBALD1Q8TB05 177 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 FCAMRQ8WWV6 532 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 SIRPDQ9H106 197 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 ANAPC10Q9UM13 185 aa13.05□□□□□ -0.32
CSNK1D-212ENST00000580061 IGKV1D-8A0A087WSZ0 117 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 hCG_1809904A0A1W2PP81 198 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 A0A1W2PPE2 198 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 A0A1W2PR64 198 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 A0A1W2PRV1 198 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 TRDCB7Z8K6 153 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 J3QLI3 93 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 GSTZ1O43708 216 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 MMP23AO75900 390 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 HBZP02008 142 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 SCTP09683 121 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 OMGP23515 440 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 KIR2DS4P43632 304 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 DGCR2P98153 550 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 KIR2DS1Q14954 304 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 METTL11BQ5VVY1 283 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 FAHD2BQ6P2I3 314 aaPredicted RBP13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 HEPN1Q6WQI6 88 aa13.04□□□□□ -0.32
CSNK1D-212ENST00000580061 PRR18Q8N4B5 295 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms