RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 ZNF184Q99676 751 aaPredicted RBP11.85□□□□□ -0.51
RN7SL560P-201ENST00000577943 CHCHD3Q9NX63 227 aaKnown RBP11.85□□□□□ -0.51
RN7SL560P-201ENST00000577943 DIMT1Q9UNQ2 313 aaKnown RBP11.85□□□□□ -0.51
RN7SL560P-201ENST00000577943 TMEM30CPA0ZSE6 113 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 EBAG9O00559 213 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 HSD17B6O14756 317 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 FGF16O43320 207 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 ZNF780AO75290 641 aaPredicted RBP11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 MPIG6BO95866 241 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 MPV17LQ2QL34 196 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 SLC22A6Q4U2R8 563 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 MOB3BQ86TA1 216 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 CHPT1Q8WUD6 406 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 CCDC107Q8WV48 283 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 CYGBQ8WWM9 190 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 ARL11Q969Q4 196 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 CKLFQ9UBR5 152 aa11.84□□□□□ -0.51
RN7SL560P-201ENST00000577943 TRBV5-5A0A0J9YX44 114 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 SERPINE3A8MV23 424 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 CCRL2O00421 344 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 SDCBPO00560 298 aaPredicted RBP11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 DUS4LO95620 317 aaKnown RBP11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 LALBAP00709 142 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 GAPDHP04406 335 aaKnown RBP11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 GTF2F2P13984 249 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 IGFBP3P17936 291 aaPredicted RBP11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 ZNF816Q0VGE8 651 aaPredicted RBP11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 LRRC36Q1X8D7 754 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 TTC23Q5W5X9 447 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 STX19Q8N4C7 294 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 OR51D1Q8NGF3 324 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 UBALD1Q8TB05 177 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 GHSRQ92847 366 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 TMEM80Q96HE8 168 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 NOL4LQ96MY1 436 aaPredicted RBP11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 LINC00527Q9UJ94 153 aa11.83□□□□□ -0.52
RN7SL560P-201ENST00000577943 IGHV3-43A0A0B4J1X8 118 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 IGHV3-72A0A0B4J1Y9 119 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 IGHV1-3A0A0C4DH29 117 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 A0A1W2PP11 408 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 MAGEA13PA6NCF6 341 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 C15orf65H3BRN8 121 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 AIPO00170 330 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 IGHV3-43DP0DP04 118 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 REG1BP48304 166 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 GPR176Q14439 515 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 Q499Y3 187 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 YIF1BQ5BJH7 314 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 DMKNQ6E0U4 476 aaPredicted RBP11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 SLC35E3Q7Z769 313 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 ZFP41Q8N8Y5 198 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 SETD9Q8NE22 299 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 OR52M1Q8NGK5 317 aa11.82□□□□□ -0.52
RN7SL560P-201ENST00000577943 TRAV8-7A0A075B6U6 113 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 PNMA8CA0A1B0GUJ8 204 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 NCBP2LA6PVI3 153 aaKnown RBP11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 NUDT19A8MXV4 375 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 MCRIP1C9JLW8 97 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 ORC5O43913 435 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 GPX5O75715 221 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 IL3RAP26951 378 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 RPL23AP62750 156 aaKnown RBP11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 SLC35B1P78383 322 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 ZNF497Q6ZNH5 498 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 FOXRED2Q8IWF2 684 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 DHRSXQ8N5I4 330 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 JAGN1Q8N5M9 183 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 LINC00311Q8N616 119 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 LINC00482Q8N8I6 264 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 MUL1Q969V5 352 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 SPACA1Q9HBV2 294 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 GFOD1Q9NXC2 390 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 TRAPPC2LQ9UL33 140 aa11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 MRPS28Q9Y2Q9 187 aaKnown RBP11.81□□□□□ -0.52
RN7SL560P-201ENST00000577943 A0A1W2PPK0 400 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 IGHG2P01859 326 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 MT-ND4P03905 459 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 MAS1P04201 325 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 FSTP19883 344 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 TAS2R43P59537 309 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 RPS11P62280 158 aaKnown RBP eCLIP11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 ST3GAL4Q11206 333 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 EBI3Q14213 229 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 AWAT2Q6E213 333 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 FAM53AQ6NSI3 398 aaPredicted RBP11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 GLIPR1L1Q6UWM5 242 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 OR2W3Q7Z3T1 314 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 MRPL41Q8IXM3 137 aaKnown RBP11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 STPG2Q8N412 459 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 COMMD1Q8N668 190 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 OR2T10Q8NGZ9 312 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 GGHQ92820 318 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 EAF1Q96JC9 268 aaPredicted RBP11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 PGLYRP3Q96LB9 341 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 OR14A2Q96R54 314 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 RAB9BQ9NP90 201 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 ZFP57Q9NU63 452 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 ETAA1Q9NY74 926 aa11.8□□□□□ -0.52
RN7SL560P-201ENST00000577943 K7EIL1 84 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms