RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	SRSF6	Q13247	344 aa	Known RBP	12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	ASB13	Q8WXK3	278 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	RAB39B	Q96DA2	213 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	PARP11	Q9NR21	331 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	COL4A2	P08572	1712 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	CYB5B	O43169	146 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	KRAS	P01116	189 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	SERPINE2	P07093	398 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	OTX1	P32242	354 aa	Predicted RBP	12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	FUT6	P51993	359 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	LHFPL2	Q6ZUX7	228 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	MCEMP1	Q8IX19	187 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	SAT2	Q96F10	170 aa	Predicted RBP	12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	SSX3	Q99909	188 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	SEMA5B	Q9P283	1151 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001	CACNG5	Q9UF02	275 aa		12.67	□□□□□ -0.38
PRPF8-216	ENST00000577001		H3BQ15	152 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	LYZL6	O75951	148 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	AGFG2	O95081	481 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	VAMP5	O95183	116 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	HNF1A	P20823	631 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	P2RY1	P47900	373 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	KCNMB1	Q16558	191 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	AKR1C8P	Q5T2L2	129 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	SSX9	Q7RTT3	188 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	CMTM1	Q8IZ96	169 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	LILRB1	Q8NHL6	650 aa	Predicted RBP	12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	OIT3	Q8WWZ8	545 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	SPSB1	Q96BD6	273 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	ARRDC1-AS1	Q9H2J1	176 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	PRO1933	Q9H354	126 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	TREM2	Q9NZC2	230 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	WSB1	Q9Y6I7	421 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	TECTA	O75443	2155 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	CDIPT	O14735	213 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	WNT9B	O14905	357 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	LAMTOR5	O43504	91 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	HOXA1	P49639	335 aa	Predicted RBP	12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	ZNF239	Q16600	458 aa	Known RBP	12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	PMS2CL	Q68D20	193 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	SELENOH	Q8IZQ5	122 aa	Known RBP	12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	BOD1	Q96IK1	185 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	CLN5	O75503	358 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	FABP1	P07148	127 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	DHRS13	Q6UX07	377 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	MKX	Q8IYA7	352 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	OR10V1	Q8NGI7	309 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	GATAD1	Q8WUU5	269 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	RHOV	Q96L33	236 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	DCTN5	Q9BTE1	182 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	ANAPC10	Q9UM13	185 aa		12.66	□□□□□ -0.38
PRPF8-216	ENST00000577001	CACNA1B	Q00975	2339 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	FAM157A	C9JC47	383 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	IFNL4	K9M1U5	179 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	RPS23	P62266	143 aa	Known RBP	12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	EXT1	Q16394	746 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	MOB3A	Q96BX8	217 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	C18orf12	Q96KH6	178 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	KPTN	Q9Y664	436 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	PRSS44	E7EML9	344 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	TAAR5	O14804	337 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	DLK1	P80370	383 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	SPNS3	Q6ZMD2	512 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	IL22RA1	Q8N6P7	574 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	UBAC2	Q8NBM4	344 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	SLC35B3	Q9H1N7	401 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	TUBD1	Q9UJT1	453 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	TRAPPC2L	Q9UL33	140 aa		12.65	□□□□□ -0.38
PRPF8-216	ENST00000577001	IGLV3-32	A0A0A0MS00	114 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	RBFOX3	A6NFN3	312 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	TRDC	B7Z8K6	153 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	IGLV3-1	P01715	115 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	ARL16	Q0P5N6	197 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	GPR146	Q96CH1	333 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	SDSL	Q96GA7	329 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	PLEKHA2	Q9HB19	425 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	SVEP1	Q4LDE5	3571 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	CEACAM18	A8MTB9	384 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	TRGC2	P03986	189 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	ARG2	P78540	354 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	TGFBR3	Q03167	851 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	DCAF12	Q5T6F0	453 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	ABHD17B	Q5VST6	288 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	SSX7	Q7RTT5	188 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	ZNF429	Q86V71	674 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	CDX2	Q99626	313 aa	Predicted RBP	12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	OR6C6	A6NF89	314 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	CEBPZOS	A8MTT3	80 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	ETV2	O00321	342 aa	Predicted RBP	12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	SLC34A2	O95436	690 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	FGF5	P12034	268 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	NR2C1	P13056	603 aa		12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001	RPUSD4	Q96CM3	377 aa	Known RBP	12.64	□□□□□ -0.39
PRPF8-216	ENST00000577001		A0A0U1RQK1	487 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	CD300LB	A8K4G0	201 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	NDUFS6	O75380	124 aa	Known RBP	12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	APOC1	P02654	83 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	CST2	P09228	141 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	OR8U8	P0C7N1	319 aa		12.63	□□□□□ -0.39
PRPF8-216	ENST00000577001	SRD5A2	P31213	254 aa		12.63	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms