RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 XAF1Q6GPH4 301 aa12□□□□□ -0.49
CTNS-209ENST00000574776 FAM53AQ6NSI3 398 aaPredicted RBP12□□□□□ -0.49
CTNS-209ENST00000574776 RPL22L1Q6P5R6 122 aaKnown RBP12□□□□□ -0.49
CTNS-209ENST00000574776 FOXRED2Q8IWF2 684 aa12□□□□□ -0.49
CTNS-209ENST00000574776 KLHL30-AS1Q8NEE0 82 aa12□□□□□ -0.49
CTNS-209ENST00000574776 APH1BQ8WW43 257 aa12□□□□□ -0.49
CTNS-209ENST00000574776 DPF1Q92782 380 aa12□□□□□ -0.49
CTNS-209ENST00000574776 ARL11Q969Q4 196 aa12□□□□□ -0.49
CTNS-209ENST00000574776 ORAI1Q96D31 301 aa12□□□□□ -0.49
CTNS-209ENST00000574776 EAF1Q96JC9 268 aaPredicted RBP12□□□□□ -0.49
CTNS-209ENST00000574776 C9orf16Q9BUW7 83 aa12□□□□□ -0.49
CTNS-209ENST00000574776 GPR61Q9BZJ8 451 aa12□□□□□ -0.49
CTNS-209ENST00000574776 TMEM30CPA0ZSE6 113 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 C15orf65H3BRN8 121 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 ZNF93P35789 620 aaPredicted RBP11.99□□□□□ -0.49
CTNS-209ENST00000574776 ETV1P50549 477 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 RBM11P57052 281 aaKnown RBP11.99□□□□□ -0.49
CTNS-209ENST00000574776 ZNF816Q0VGE8 651 aaPredicted RBP11.99□□□□□ -0.49
CTNS-209ENST00000574776 SMN1Q16637 294 aaKnown RBP11.99□□□□□ -0.49
CTNS-209ENST00000574776 ATAD3CQ5T2N8 411 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 DDI2Q5TDH0 399 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 STPG2Q8N412 459 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 TMEM106AQ96A25 262 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 DUX3Q96PT4 197 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 P2RX4Q99571 388 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 S100A13Q99584 98 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 MCRIP2Q9BUT9 160 aaKnown RBP11.99□□□□□ -0.49
CTNS-209ENST00000574776 IFT22Q9H7X7 185 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 FGF20Q9NP95 211 aaPredicted RBP11.99□□□□□ -0.49
CTNS-209ENST00000574776 TMEM138Q9NPI0 162 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 IL36GQ9NZH8 169 aa11.99□□□□□ -0.49
CTNS-209ENST00000574776 SIRT4Q9Y6E7 314 aaPredicted RBP11.99□□□□□ -0.49
CTNS-209ENST00000574776 IGHV3-43A0A0B4J1X8 118 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 A0A1W2PP11 408 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 SDCBPO00560 298 aaPredicted RBP11.98□□□□□ -0.49
CTNS-209ENST00000574776 IGHV3-43DP0DP04 118 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 SERPINA2P20848 420 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 BDKRB2P30411 391 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 PPP3R1P63098 170 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 CD69Q07108 199 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 CCDC58Q4VC31 144 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 NHLRC3Q5JS37 347 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 OR2G6Q5TZ20 316 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 ZNF695Q8IW36 515 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 COMMD1Q8N668 190 aa11.98□□□□□ -0.49
CTNS-209ENST00000574776 TENM3Q9P273 2699 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 WBP4O75554 376 aaKnown RBP11.97□□□□□ -0.49
CTNS-209ENST00000574776 MT-ND4P03905 459 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 SLC6A1P30531 599 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 GPR12P47775 334 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 PNLIPRP3Q17RR3 467 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 SLC22A6Q4U2R8 563 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 TEX38Q6PEX7 206 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 UNQ9370/PRO34162Q6UXP9 181 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 TMPRSS11AQ6ZMR5 421 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 LCNL1Q6ZST4 164 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 TGIF2LXQ8IUE1 241 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 C10orf67Q8IYJ2 551 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 LINC00311Q8N616 119 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 Q8N6K4 173 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 OR52M1Q8NGK5 317 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 OR13C5Q8NGS8 318 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 OR2T10Q8NGZ9 312 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 NEK7Q8TDX7 302 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 RBMXL1Q96E39 390 aaKnown RBP11.97□□□□□ -0.49
CTNS-209ENST00000574776 RAX2Q96IS3 184 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 ABCG5Q9H222 651 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.97□□□□□ -0.49
CTNS-209ENST00000574776 PLSCR3Q9NRY6 295 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 PAK1IP1Q9NWT1 392 aaPredicted RBP11.97□□□□□ -0.49
CTNS-209ENST00000574776 GFOD1Q9NXC2 390 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 BABAM2Q9NXR7 383 aa11.97□□□□□ -0.49
CTNS-209ENST00000574776 ZNF736B4DX44 427 aaPredicted RBP11.96□□□□□ -0.49
CTNS-209ENST00000574776 CCL24O00175 119 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 AP4M1O00189 453 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 OGG1O15527 345 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 ORC5O43913 435 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 RPLP1P05386 114 aaKnown RBP11.96□□□□□ -0.49
CTNS-209ENST00000574776 DCKP27707 260 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 RAB25P57735 213 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 MPV17LQ2QL34 196 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 ZNF497Q6ZNH5 498 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 LINC00596Q86U02 117 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 IZUMO1Q8IYV9 350 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 C8orf31Q8N9H6 132 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 Q8N9W7 124 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 RTN4IP1Q8WWV3 396 aaPredicted RBP11.96□□□□□ -0.49
CTNS-209ENST00000574776 TFAP2CQ92754 450 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 ST6GALNAC6Q969X2 333 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 ZNF184Q99676 751 aaPredicted RBP11.96□□□□□ -0.49
CTNS-209ENST00000574776 B9D2Q9BPU9 175 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 DCLRE1BQ9H816 532 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 S100A14Q9HCY8 104 aa11.96□□□□□ -0.49
CTNS-209ENST00000574776 LIN7CQ9NUP9 197 aaKnown RBP11.96□□□□□ -0.49
CTNS-209ENST00000574776 KMT2CQ8NEZ4 4911 aaKnown RBP11.95□□□□□ -0.5
CTNS-209ENST00000574776 H0YHG0 523 aa11.95□□□□□ -0.5
CTNS-209ENST00000574776 SLC31A2O15432 143 aa11.95□□□□□ -0.5
CTNS-209ENST00000574776 ZNF780AO75290 641 aaPredicted RBP11.95□□□□□ -0.5
CTNS-209ENST00000574776 MOSP00540 346 aa11.95□□□□□ -0.5
CTNS-209ENST00000574776 LALBAP00709 142 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms