RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 SEC61A1P61619 476 aaKnown RBP19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 TATDN3Q17R31 274 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 CHRFAM7AQ494W8 412 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 ZNF841Q6ZN19 808 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 MOB1BQ7L9L4 216 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 NLRC3Q7RTR2 1065 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 OR8B3Q8NGG8 313 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 OR4C16Q8NGL9 310 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 OR13A1Q8NGR1 328 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 MRGPRDQ8TDS7 321 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 NEIL1Q96FI4 390 aaPredicted RBP19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 OR8B2Q96RD0 313 aa19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 MBNL3Q9NUK0 354 aaKnown RBP19.93■□□□□ 0.78
ATPAF1-213ENST00000574428 UNC79Q9P2D8 2635 aa19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 RAB3DO95716 219 aa19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 CD74P04233 296 aa19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 GSTT2P0CG29 244 aa19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 ERP29P30040 261 aaKnown RBP19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 GLP1RP43220 463 aa19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 CCR6P51684 374 aa19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 ARPC4P59998 168 aa19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 UBALD1Q8TB05 177 aa19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 H1FXQ92522 213 aaKnown RBP19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 PATZ1Q9HBE1 687 aaKnown RBP19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 MCUBQ9NWR8 336 aa19.92■□□□□ 0.78
ATPAF1-213ENST00000574428 TRDCB7Z8K6 153 aa19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 INMT-MINDY4F8WBC2 141 aa19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 SCTP09683 121 aa19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 HLA-DRB3P79483 266 aa19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 SRSF7Q16629 238 aaKnown RBP eCLIP19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 Q6ZS49 121 aa19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 PRR18Q8N4B5 295 aa19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 OR5AP2Q8NGF4 316 aa19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 OR5H2Q8NGV7 314 aa19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 ALG5Q9Y673 324 aa19.91■□□□□ 0.78
ATPAF1-213ENST00000574428 IGHV4-30-2A0A087WSY4 118 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 NDUFS8O00217 210 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 TCRBP04435 133 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 TAS2R46P59540 309 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 RNASE10Q5GAN6 216 aaKnown RBP19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 OR56B4Q8NH76 319 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 LURAP1Q96LR2 239 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 C19orf12Q9NSK7 152 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 NUDT15Q9NV35 164 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 NUBP2Q9Y5Y2 271 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 KIR2DS1A0A191URI9 304 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 POM121CA8CG34 1229 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 SDCBPO00560 298 aaPredicted RBP19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 FABP7O15540 132 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 KIR2DS4P43632 304 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 RAB25P57735 213 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 KIR2DS1Q14954 304 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 IGSF11Q5DX21 431 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 TCF23Q7RTU1 214 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 TAF9BQ9HBM6 251 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 COPZ2Q9P299 210 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 CLN8Q9UBY8 286 aa19.9■□□□□ 0.78
ATPAF1-213ENST00000574428 NAP1L6A6NFF2 107 aa19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 C12orf77C9JDV5 145 aa19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 F5H0A9 414 aaPredicted RBP19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 TBPP20226 339 aa19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 SSTR5P35346 364 aa19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 FAUP35544 74 aaKnown RBP19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 OR3A3P47888 321 aa19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 RPL31P62899 125 aaKnown RBP19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 ACTBL2Q562R1 376 aa19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 EHFQ9NZC4 300 aa19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 KCNIP1Q9NZI2 227 aa19.89■□□□□ 0.77
ATPAF1-213ENST00000574428 TRAV6A0A075B6T7 132 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 VWC2LB2RUY7 222 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 AMY2AP04746 511 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 CDK10Q15131 360 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 HMGN3Q15651 99 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 CLEC12BQ2HXU8 276 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 C6orf183Q5T699 404 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 WDR25Q64LD2 544 aaPredicted RBP19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 CLDND2Q8NHS1 167 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 MBD6Q96DN6 1003 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 KIRREL1Q96J84 757 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 NCOR1P1Q9H4R4 102 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 OR6C3Q9NZP0 311 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 MGAT4AQ9UM21 535 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 NAV2Q8IVL1 2488 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 PHF1O43189 567 aaPredicted RBP19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 IGHV2-5P01817 119 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 DSCR9P59020 149 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 MEF2DQ14814 521 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 HERPUD1Q15011 391 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 DEDD2Q8WXF8 326 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 SLC6A7Q99884 636 aa19.88■□□□□ 0.77
ATPAF1-213ENST00000574428 TRGV10A0A0A0MS01 117 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 IGKV1-6A0A0C4DH72 117 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 HMX3A6NHT5 357 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 CCNKO75909 580 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 TRAPPC2P0DI81 140 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 TRAPPC2BP0DI82 140 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 VAX1Q5SQQ9 334 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 ZNF782Q6ZMW2 699 aaPredicted RBP19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 BTN2A1Q7KYR7 527 aa19.87■□□□□ 0.77
ATPAF1-213ENST00000574428 LRRC75A-AS1Q8N1F1 130 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms