RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 AUP1Q9Y679 476 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 TRBV6-7A0A0A0MS04 114 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 TRDCB7Z8K6 153 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 SPP1P10451 314 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 UCP3P55916 312 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 TMEM187Q14656 261 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 HERPUD1Q15011 391 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 PRSS54Q6PEW0 395 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 BEND4Q6ZU67 534 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 OR1S1Q8NH92 325 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 BOD1Q96IK1 185 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 TMEM100Q9NV29 134 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 RASL12Q9NYN1 266 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 ATP23Q9Y6H3 246 aa8.89□□□□□ -0.99
USP43-205ENST00000574408 IGHV2OR16-5A0A0B4J2B6 119 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 IGHV1-18A0A0C4DH31 117 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 TIMM8AO60220 97 aaPredicted RBP8.88□□□□□ -0.99
USP43-205ENST00000574408 CD80P33681 288 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 SPIN3Q5JUX0 258 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 C1orf185Q5T7R7 199 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 RBMS3Q6XE24 437 aaKnown RBP8.88□□□□□ -0.99
USP43-205ENST00000574408 PUSL1Q8N0Z8 303 aaKnown RBP8.88□□□□□ -0.99
USP43-205ENST00000574408 CCDC71LQ8N9Z2 235 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 OR10Z1Q8NGY1 313 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 GALNT14Q96FL9 552 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 RIMS4Q9H426 269 aaPredicted RBP8.88□□□□□ -0.99
USP43-205ENST00000574408 PHF1O43189 567 aaPredicted RBP8.88□□□□□ -0.99
USP43-205ENST00000574408 MLNRO43193 412 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 IGLV1-44P01699 117 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 RCC1P18754 421 aaPredicted RBP8.88□□□□□ -0.99
USP43-205ENST00000574408 ID4P47928 161 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 SRSF7Q16629 238 aaKnown RBP eCLIP8.88□□□□□ -0.99
USP43-205ENST00000574408 Q6P435 159 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 Q8IYB0 196 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 ZNF565Q8N9K5 539 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 OR8G5Q8NG78 346 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 NRIP2Q9BQI9 281 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 BCL2L14Q9BZR8 327 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 EIF5A2Q9GZV4 153 aaKnown RBP8.88□□□□□ -0.99
USP43-205ENST00000574408 SHARPINQ9H0F6 387 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 URGCP-MRPS24S4R325 110 aa8.88□□□□□ -0.99
USP43-205ENST00000574408 IGKV1-6A0A0C4DH72 117 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 MSGN1A6NI15 193 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 PGA5P0DJD9 388 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 GCH1P30793 250 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 ERVK11-1P61568 191 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 IL15RAQ13261 267 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 SNTB1Q13884 538 aaKnown RBP8.87□□□□□ -0.99
USP43-205ENST00000574408 HNF4GQ14541 408 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 SUCNR1Q9BXA5 334 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 PRELID3BQ9Y3B1 194 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 ZGRF1Q86YA3 2104 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 ICE1Q9Y2F5 2266 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 TRAV39A0A0B4J263 110 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.87□□□□□ -0.99
USP43-205ENST00000574408 A6NLC8 198 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 PROB1E7EW31 1015 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 OR2H2O95918 312 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 CRYBA1P05813 215 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 PET100P0DJ07 73 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 SRSF3P84103 164 aaKnown RBP8.87□□□□□ -0.99
USP43-205ENST00000574408 PEA15Q15121 130 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 ZNF718Q3SXZ3 478 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 ZNF474Q6S9Z5 364 aaPredicted RBP8.87□□□□□ -0.99
USP43-205ENST00000574408 LIAT1Q6ZQX7 453 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 ZNF826PQ6ZT77 177 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 LYZL2Q7Z4W2 148 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 GLYATL2Q8WU03 294 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 GTF3AQ92664 365 aaKnown RBP8.87□□□□□ -0.99
USP43-205ENST00000574408 ABHD17AQ96GS6 310 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 MSL2Q9HCI7 577 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 AMDHD2Q9Y303 409 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 SLC25A15Q9Y619 301 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 PCNX1Q96RV3 2341 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 IGKV1D-13A0A0B4J2D9 117 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 TMEM210A6NLX4 147 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 IGKV1-13P0DP09 117 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 GNRHRP30968 328 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 ZNF83P51522 516 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 B2MP61769 119 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 KIAA2026Q5HYC2 2103 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 MEX3BQ6ZN04 569 aaKnown RBP8.87□□□□□ -0.99
USP43-205ENST00000574408 SVBPQ8N300 66 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 CNTNAP3BQ96NU0 1288 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 SLC5A7Q9GZV3 580 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 RHOFQ9HBH0 211 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 UFSP2Q9NUQ7 469 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 OR14J1Q9UGF5 321 aa8.87□□□□□ -0.99
USP43-205ENST00000574408 PTPRQQ9UMZ3 2332 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 CTXN2P0C2S0 81 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 C9orf152Q5JTZ5 239 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 LGI3Q8N145 548 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 IL1F10Q8WWZ1 152 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 S100PBPQ96BU1 408 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 GPHA2Q96T91 129 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 SCNM1Q9BWG6 230 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 TLNRD1Q9H1K6 362 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 IFT22Q9H7X7 185 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 BIN3Q9NQY0 253 aa8.86□□□□□ -0.99
USP43-205ENST00000574408 LSM5Q9Y4Y9 91 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms