RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 BLVRBP30043 206 aaPredicted RBP9□□□□□ -0.97
CHD3-216ENST00000573936 RPS19P39019 145 aaKnown RBP9□□□□□ -0.97
CHD3-216ENST00000573936 SCAND1P57086 179 aa9□□□□□ -0.97
CHD3-216ENST00000573936 BAMBIQ13145 260 aa9□□□□□ -0.97
CHD3-216ENST00000573936 DEFB112Q30KQ8 113 aa9□□□□□ -0.97
CHD3-216ENST00000573936 C6orf183Q5T699 404 aa9□□□□□ -0.97
CHD3-216ENST00000573936 SIGIRRQ6IA17 410 aa9□□□□□ -0.97
CHD3-216ENST00000573936 HCP5Q6MZN7 132 aa9□□□□□ -0.97
CHD3-216ENST00000573936 TRAT1Q6PIZ9 186 aa9□□□□□ -0.97
CHD3-216ENST00000573936 ZNF782Q6ZMW2 699 aaPredicted RBP9□□□□□ -0.97
CHD3-216ENST00000573936 RTN4RL2Q86UN3 420 aa9□□□□□ -0.97
CHD3-216ENST00000573936 PNKDQ8N490 385 aa9□□□□□ -0.97
CHD3-216ENST00000573936 SIGLECL1Q8N7X8 197 aa9□□□□□ -0.97
CHD3-216ENST00000573936 OR11H6Q8NGC7 330 aa9□□□□□ -0.97
CHD3-216ENST00000573936 OR13A1Q8NGR1 328 aa9□□□□□ -0.97
CHD3-216ENST00000573936 ZFAND2BQ8WV99 257 aa9□□□□□ -0.97
CHD3-216ENST00000573936 DCSTAMPQ9H295 470 aa9□□□□□ -0.97
CHD3-216ENST00000573936 TMEM133Q9H2Q1 129 aa9□□□□□ -0.97
CHD3-216ENST00000573936 LINC00574Q9H8X3 128 aa9□□□□□ -0.97
CHD3-216ENST00000573936 LIN7BQ9HAP6 207 aa9□□□□□ -0.97
CHD3-216ENST00000573936 PLEKHJ1Q9NW61 149 aa9□□□□□ -0.97
CHD3-216ENST00000573936 CALYQ9NYX4 217 aa9□□□□□ -0.97
CHD3-216ENST00000573936 TRAPPC2LQ9UL33 140 aa9□□□□□ -0.97
CHD3-216ENST00000573936 HSF4Q9ULV5 492 aa9□□□□□ -0.97
CHD3-216ENST00000573936 MGAM2Q2M2H8 2515 aa9□□□□□ -0.97
CHD3-216ENST00000573936 A0A1W2PRD5 423 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 A0A1W2PRF3 423 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 A0A1W2PRM7 423 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 MEX3AA1L020 520 aaKnown RBP8.99□□□□□ -0.97
CHD3-216ENST00000573936 UBE2QL1A1L167 161 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 MEIOCA2RUB1 952 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 ORC5O43913 435 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 PAHP00439 452 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 COX7A1P24310 79 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 VEGFCP49767 419 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 DLX1P56177 255 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 C17orf58Q2M2W7 97 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 NKAPLQ5M9Q1 402 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 SFXN4Q6P4A7 337 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 Q6YL49 198 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 Q6ZTK2 550 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 C3orf56Q8N813 242 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 ZNF596Q8TC21 504 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 DYNC2LI1Q8TCX1 351 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 MRGPRDQ8TDS7 321 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 ZNF48Q96MX3 618 aaPredicted RBP8.99□□□□□ -0.97
CHD3-216ENST00000573936 NICN1Q9BSH3 213 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 CLEC7AQ9BXN2 247 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 RIMS4Q9H426 269 aaPredicted RBP8.99□□□□□ -0.97
CHD3-216ENST00000573936 KCNK15Q9H427 330 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 IDI2-AS1Q9NZ38 188 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 DAPK2Q9UIK4 370 aa8.99□□□□□ -0.97
CHD3-216ENST00000573936 TBL2Q9Y4P3 447 aaKnown RBP8.99□□□□□ -0.97
CHD3-216ENST00000573936 PKD1L1Q8TDX9 2849 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 A0A0A6YYD4 124 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 IGHV2-26A0A0B4J1V2 119 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 A0A0U1RQK1 487 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 POM121CA8CG34 1229 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 NPIPB11E5RHQ5 1161 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 SOCS1O15524 211 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 SPINT2O43291 252 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 SCGNO76038 276 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 VENTXO95231 258 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 ARG1P05089 322 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 SLC2A2P11168 524 aaPredicted RBP8.98□□□□□ -0.97
CHD3-216ENST00000573936 CD34P28906 385 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 SAA4P35542 130 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 PRRX1P54821 245 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 PRB3Q04118 309 aaPredicted RBP8.98□□□□□ -0.97
CHD3-216ENST00000573936 DYNC1I2Q13409 638 aaKnown RBP8.98□□□□□ -0.97
CHD3-216ENST00000573936 ARL6IP1Q15041 203 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 TMEM30BQ3MIR4 351 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 MINOS1Q5TGZ0 78 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 PRAMEF5Q5TYX0 476 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 ZNF626Q68DY1 528 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 C6orf201Q7Z4U5 140 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 ZNF554Q86TJ5 538 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 GAPTQ8N292 157 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 ABHD12Q8N2K0 398 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 TMEM86BQ8N661 226 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 SGMS2Q8NHU3 365 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 CCDC107Q8WV48 283 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 ARL11Q969Q4 196 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 SLC25A46Q96AG3 418 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 SULT4A1Q9BR01 284 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 FAAP24Q9BTP7 215 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 DPAGT1Q9H3H5 408 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 KCNIP1Q9NZI2 227 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 MINOS1-NBL1R4GNA1 71 aa8.98□□□□□ -0.97
CHD3-216ENST00000573936 WNK2Q9Y3S1 2297 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 A0A087X0M5 115 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 A0A1B0GX30 115 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 ODF3BA8MYP8 253 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 CLDN34H7C241 214 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 TOR1AO14656 332 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 MMP23AO75900 390 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 OMGP23515 440 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 NFYBP25208 207 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 TMEM50BP56557 158 aa8.97□□□□□ -0.97
CHD3-216ENST00000573936 ACTG1P63261 375 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms