RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 ZNF295-AS1Q8N0V1 137 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 TVP23CQ96ET8 276 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 ATP23Q9Y6H3 246 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 TGIF2-C20orf24A0A0A6YYL0 155 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 PINLYPA6NC86 204 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 H0Y980 276 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 SPINK2P20155 84 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 TAS2R30P59541 319 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 RPL23AP62750 156 aaKnown RBP16.3■□□□□ 0.2
SCARF1-206ENST00000573852 ARF1P84077 181 aaKnown RBP16.3■□□□□ 0.2
SCARF1-206ENST00000573852 ZNF674Q2M3X9 581 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 PCSK4Q6UW60 755 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 PRDM6Q9NQX0 595 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 DOK5Q9P104 306 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 TCFL5Q9UL49 500 aa16.3■□□□□ 0.2
SCARF1-206ENST00000573852 KIR2DS1A0A191URI9 304 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 F10P00742 488 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 KIR2DS4P43632 304 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 TLE4Q04727 773 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 IL24Q13007 206 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 KIR2DS1Q14954 304 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 THNSL2Q86YJ6 484 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 NIPSNAP3BQ9BS92 247 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 C3orf80F5H4A9 247 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 SYNGR1O43759 233 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 CDX1P47902 265 aaPredicted RBP16.29■□□□□ 0.2
SCARF1-206ENST00000573852 IZUMO4Q1ZYL8 232 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 CEACAM21Q3KPI0 293 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 SAXO1Q8IYX7 474 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 RBMXL1Q96E39 390 aaKnown RBP16.29■□□□□ 0.2
SCARF1-206ENST00000573852 PRRG4Q9BZD6 226 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 PILRBQ9UKJ0 227 aa16.29■□□□□ 0.2
SCARF1-206ENST00000573852 C5orf49A4QMS7 147 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 GDF1P27539 372 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 OTX2P32243 289 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 RAB2AP61019 212 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 ZDHHC23Q8IYP9 409 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 GPR146Q96CH1 333 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 HIPK2Q9H2X6 1198 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 NOSIPQ9Y314 301 aaKnown RBP16.28■□□□□ 0.2
SCARF1-206ENST00000573852 TRAPPC2LH3BP13 241 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 HLA-HP01893 362 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 F2RP25116 425 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 FOXG1P55316 489 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-206ENST00000573852 TMEM267Q0VDI3 215 aaPredicted RBP16.28■□□□□ 0.2
SCARF1-206ENST00000573852 MPV17LQ2QL34 196 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 PPP1R32Q7Z5V6 425 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 MRPL30Q8TCC3 161 aaKnown RBP16.28■□□□□ 0.2
SCARF1-206ENST00000573852 IL22RA2Q969J5 263 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 ZNF488Q96MN9 340 aa16.28■□□□□ 0.2
SCARF1-206ENST00000573852 TNRC6BQ9UPQ9 1833 aaKnown RBP16.27■□□□□ 0.2
SCARF1-206ENST00000573852 ZNF503-AS2A6NEH8 195 aa16.27■□□□□ 0.2
SCARF1-206ENST00000573852 KIAA1324LA8MWY0 1029 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-206ENST00000573852 NTN3O00634 580 aaPredicted RBP16.27■□□□□ 0.2
SCARF1-206ENST00000573852 CTXN2P0C2S0 81 aa16.27■□□□□ 0.2
SCARF1-206ENST00000573852 GLIPR1P48060 266 aa16.27■□□□□ 0.2
SCARF1-206ENST00000573852 GFRA1P56159 465 aa16.27■□□□□ 0.2
SCARF1-206ENST00000573852 ZFP36L1Q07352 338 aaKnown RBP16.27■□□□□ 0.2
SCARF1-206ENST00000573852 KHDC3LQ587J8 217 aa16.27■□□□□ 0.2
SCARF1-206ENST00000573852 ZNF610Q8N9Z0 462 aa16.27■□□□□ 0.2
SCARF1-206ENST00000573852 MRPL33O75394 65 aaKnown RBP16.27■□□□□ 0.19
SCARF1-206ENST00000573852 HBE1P02100 147 aa16.27■□□□□ 0.19
SCARF1-206ENST00000573852 PYY3Q5JQD4 70 aa16.27■□□□□ 0.19
SCARF1-206ENST00000573852 SPNS3Q6ZMD2 512 aa16.27■□□□□ 0.19
SCARF1-206ENST00000573852 MRPL21Q7Z2W9 205 aaKnown RBP16.27■□□□□ 0.19
SCARF1-206ENST00000573852 OR51H1Q8NH63 302 aa16.27■□□□□ 0.19
SCARF1-206ENST00000573852 ZNF552Q9H707 407 aaPredicted RBP16.27■□□□□ 0.19
SCARF1-206ENST00000573852 LOC102723971A0A1B0GUV8 181 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 CFIP05156 583 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 RD3LP0DJH9 198 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 RNPS1Q15287 305 aaKnown RBP16.26■□□□□ 0.19
SCARF1-206ENST00000573852 ZNF324BQ6AW86 544 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-206ENST00000573852 DPPA3Q6W0C5 159 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 Q6ZRM9 215 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 SLC35E3Q7Z769 313 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 STX12Q86Y82 276 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 MKXQ8IYA7 352 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 TMEM45BQ96B21 275 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 SIRT7Q9NRC8 400 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 GNG13Q9P2W3 67 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HS3ST1O14792 307 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2BKO60814 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 NGFP01138 241 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2BJP06899 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 PSG2P11465 335 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2BOP23527 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2BBP33778 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2BDP58876 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2BCP62807 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 OR8G1Q15617 311 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST2H2BEQ16778 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2BHQ93079 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2BNQ99877 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 HIST1H2BMQ99879 126 aa16.26■□□□□ 0.19
SCARF1-206ENST00000573852 CXorf65A6NEN9 183 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 CYB5BO43169 146 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 NRN1LQ496H8 165 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 PMS2CLQ68D20 193 aa16.25■□□□□ 0.19
SCARF1-206ENST00000573852 CDPF1Q6NVV7 123 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms