RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 ARR3P36575 388 aa9.57□□□□□ -0.88
RPAIN-212ENST00000573126 RND3P61587 244 aa9.57□□□□□ -0.88
RPAIN-212ENST00000573126 TMEM164Q5U3C3 297 aa9.57□□□□□ -0.88
RPAIN-212ENST00000573126 PLEKHF2Q9H8W4 249 aa9.57□□□□□ -0.88
RPAIN-212ENST00000573126 RYDENQ9NUL5 291 aaKnown RBP9.57□□□□□ -0.88
RPAIN-212ENST00000573126 STRAPQ9Y3F4 350 aaKnown RBP9.57□□□□□ -0.88
RPAIN-212ENST00000573126 A0A0G2JRQ6 117 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 CHST1O43916 411 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 PITX3O75364 302 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 IL18BPO95998 194 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 APLNRP35414 380 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 MEOX1P50221 254 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 DYNLT3P51808 116 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 ZNF154Q13106 437 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 HMGN3Q15651 99 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 KRBOX4Q5JUW0 171 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 ODF3L1Q8IXM7 274 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 HIST1H2BAQ96A08 127 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 POM121Q96HA1 1249 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 KCNJ16Q9NPI9 418 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 ERRFI1Q9UJM3 462 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-212ENST00000573126 NBEAQ8NFP9 2946 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 A0A1W2PR80 420 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 ZNF98A6NK75 572 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 WRBO00258 174 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 HOXA1P49639 335 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-212ENST00000573126 GNG3P63215 75 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 HABP2Q14520 560 aaPredicted RBP9.56□□□□□ -0.88
RPAIN-212ENST00000573126 SRSF7Q16629 238 aaKnown RBP eCLIP9.56□□□□□ -0.88
RPAIN-212ENST00000573126 ATP1A1-AS1Q5TC04 95 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 P4HA3Q7Z4N8 544 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 FAM58AQ8N1B3 248 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 OR10J5Q8NHC4 309 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 PBDC1Q9BVG4 233 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 GPR87Q9BY21 358 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 DEFB127Q9H1M4 99 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 SLC35B3Q9H1N7 401 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 OR1A1Q9P1Q5 309 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 BDP1A6H8Y1 2624 aa9.56□□□□□ -0.88
RPAIN-212ENST00000573126 A6NLC8 198 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 ARG1P05089 322 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 F2RP25116 425 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 LMO1P25800 156 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 CEBPGP53567 150 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 ID3Q02535 119 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 ZNF573Q86YE8 665 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 DEFB123Q8N688 67 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 IL22RA1Q8N6P7 574 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 C15orf54Q8N8G6 183 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 PLPPR1Q8TBJ4 325 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 C12orf57Q99622 126 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 SLC25A31Q9H0C2 315 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 TAAR3PQ9P1P4 343 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 MED12LQ86YW9 2145 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 DSPP15924 2871 aaKnown RBP9.55□□□□□ -0.88
RPAIN-212ENST00000573126 A0A1W2PPH5 198 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 H0Y980 276 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 MT-CO3P00414 261 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 SP1P08047 785 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 CTXN2P0C2S0 81 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 PSG2P11465 335 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 SNRPEP62304 92 aaKnown RBP9.55□□□□□ -0.88
RPAIN-212ENST00000573126 RNPS1Q15287 305 aaKnown RBP9.55□□□□□ -0.88
RPAIN-212ENST00000573126 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.55□□□□□ -0.88
RPAIN-212ENST00000573126 MDP1Q86V88 176 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 MYPOPQ86VE0 399 aaPredicted RBP9.55□□□□□ -0.88
RPAIN-212ENST00000573126 SFT2D1Q8WV19 159 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 DLL3Q9NYJ7 618 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 OR2W1Q9Y3N9 320 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 PUS1Q9Y606 427 aaKnown RBP eCLIP9.55□□□□□ -0.88
RPAIN-212ENST00000573126 ESPL1Q14674 2120 aa9.55□□□□□ -0.88
RPAIN-212ENST00000573126 hCG_1809904A0A1W2PP81 198 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 A0A1W2PPE2 198 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 A0A1W2PR64 198 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 A0A1W2PRV1 198 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 C21orf140B9A014 251 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 SERPINE2P07093 398 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 SHEQ5VZ18 495 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 ZNF324BQ6AW86 544 aaPredicted RBP9.54□□□□□ -0.88
RPAIN-212ENST00000573126 DHRS13Q6UX07 377 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 OR5D13Q8NGL4 314 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 PLK3Q9H4B4 646 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 RNF122Q9H9V4 155 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 OR5B21A6NL26 309 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 PRSS44E7EML9 344 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 CELA3BP08861 270 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 ZNF883P0CG24 379 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 SELEP16581 610 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 PTAFRP25105 342 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 RAB5BP61020 215 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 HAGHQ16775 308 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 FAM24BQ8N5W8 94 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 RNASE11Q8TAA1 199 aaKnown RBP9.54□□□□□ -0.88
RPAIN-212ENST00000573126 RNF115Q9Y4L5 304 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 MPC1Q9Y5U8 109 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 TNRC6AQ8NDV7 1962 aaKnown RBP9.54□□□□□ -0.88
RPAIN-212ENST00000573126 CLEC18AA5D8T8 446 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 SIRPB1O00241 398 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 DEGS1O15121 323 aa9.54□□□□□ -0.88
RPAIN-212ENST00000573126 HSPA12AO43301 675 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms