RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 DPM3Q9P2X0 92 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 TCF19Q9Y242 345 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 PEX16Q9Y5Y5 336 aa8.23□□□□□ -1.09
GTF3C1-213ENST00000571886 A0A0A6YYD4 124 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 IGHV3-43A0A0B4J1X8 118 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 A0A1B0GUS0 222 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 TMEM30CPA0ZSE6 113 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 FAM90A22PA8MWA6 464 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 TMEM14DPA8MWL7 114 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 MCRIP1C9JLW8 97 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 BUB1B-PAK6H3BSN5 160 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 J3QR06 171 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 SLC22A1O15245 554 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 IGHV3-43DP0DP04 118 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 HTR2CP28335 458 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 GNG10P50151 68 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 PLA2G7Q13093 441 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 RBM39Q14498 530 aaKnown RBP8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 HABP2Q14520 560 aaPredicted RBP8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 P2RY14Q15391 338 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 SYT6Q5T7P8 510 aaPredicted RBP8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 GLT8D1Q68CQ7 371 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 RAB12Q6IQ22 244 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 ZNF367Q7RTV3 350 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 SPARTQ8N0X7 666 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 ZNF596Q8TC21 504 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 NEK7Q8TDX7 302 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 ARL11Q969Q4 196 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 RBMXL1Q96E39 390 aaKnown RBP8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 MRPS24Q96EL2 167 aaKnown RBP8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 CITED1Q99966 193 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 NICN1Q9BSH3 213 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 PSG11Q9UQ72 335 aa8.22□□□□□ -1.09
GTF3C1-213ENST00000571886 AIPO00170 330 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 TOR1AO14656 332 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 SLC31A2O15432 143 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 RCC1P18754 421 aaPredicted RBP8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 GZMHP20718 246 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 FUT3P21217 361 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 CALRP27797 417 aaKnown RBP8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 GABRA5P31644 462 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 KIR2DS4P43632 304 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 DYNLT3P51808 116 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 PRRX1P54821 245 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 CLDN12P56749 244 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 LOXL3P58215 753 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 GABARAPL2P60520 117 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 BLCAPP62952 87 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 TPTE2P1Q5T6R2 138 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 Q6ZPA2 131 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 GAPTQ8N292 157 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 OR9G1Q8NH87 305 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 OR1L1Q8NH94 360 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 SULT4A1Q9BR01 284 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 FAAP24Q9BTP7 215 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 MMP28Q9H239 520 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 ZNF702PQ9H963 129 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 ABCB10Q9NRK6 738 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 ETAA1Q9NY74 926 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 GHRLQ9UBU3 117 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 FBLN5Q9UBX5 448 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 BLOC1S6Q9UL45 172 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 TRRAPQ9Y4A5 3859 aa8.21□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A10PA6NDY2 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A18PA6NE21 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A16PA6NEW6 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A20PA6NIJ5 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A7PA6NKC0 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A12PA8MX19 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A5PA8MXJ8 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A23PA8MXZ1 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 LEUTXA8MZ59 168 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 C12orf77C9JDV5 145 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 SLC17A2O00624 439 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 SOCS1O15524 211 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 PDCD6O75340 191 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A15PP0C7V4 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A13PP0C7W8 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A14PP0C7W9 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 FAM90A24PP0C7X0 464 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 CHATP28329 748 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 EFNB2P52799 333 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 OR10A3P58181 314 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 RPS27AP62979 156 aaKnown RBP8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 TRAM1Q15629 374 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 NKAPLQ5M9Q1 402 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 UBE2UQ5VVX9 321 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 CD200R1LQ6Q8B3 271 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 C6orf201Q7Z4U5 140 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 OR51D1Q8NGF3 324 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 SGMS2Q8NHU3 365 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 MRPL30Q8TCC3 161 aaKnown RBP8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 TM2D1Q9BX74 207 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 LPAR5Q9H1C0 372 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 GFOD1Q9NXC2 390 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 TRAPPC2LQ9UL33 140 aa8.2□□□□□ -1.1
GTF3C1-213ENST00000571886 SH2D7A6NKC9 451 aaPredicted RBP8.19□□□□□ -1.1
GTF3C1-213ENST00000571886 F2RL2O00254 374 aa8.19□□□□□ -1.1
GTF3C1-213ENST00000571886 SDCBPO00560 298 aaPredicted RBP8.19□□□□□ -1.1
GTF3C1-213ENST00000571886 ORC5O43913 435 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms