RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 GEMIN2O14893 280 aaKnown RBP9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 MYL12BO14950 172 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 XPNPEP2O43895 674 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 IGHV3-7P01780 117 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 H2AFB1P0C5Y9 115 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 H2AFB2P0C5Z0 115 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM106CPP0CH98 169 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 CGB3P0DN86 165 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 CGB7P0DN87 165 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 GTF2F2P13984 249 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 FSTP19883 344 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 SSTR5P35346 364 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 CAPGP40121 348 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 GNG10P50151 68 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 ADARB1P78563 741 aaKnown RBP9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 ST3GAL4Q11206 333 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 MADCAM1Q13477 382 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 MPV17LQ2QL34 196 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 SLC22A6Q4U2R8 563 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 ABCA11PQ4W5N1 156 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 UTF1Q5T230 341 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 RFESDQ8TAC1 157 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 NEK7Q8TDX7 302 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 GGHQ92820 318 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 LEAP2Q969E1 77 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 R3HDM4Q96D70 268 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 PGLYRP3Q96LB9 341 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 RBM14Q96PK6 669 aaKnown RBP9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 VCXQ9H320 206 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 LINC00574Q9H8X3 128 aa9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 CNOT2Q9NZN8 540 aaKnown RBP9.88□□□□□ -0.83
CTDNEP1-205ENST00000570828 TRAV8-7A0A075B6U6 113 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 PNMA8CA0A1B0GUJ8 204 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 MAGEA13PA6NCF6 341 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 NPIPB11E5RHQ5 1161 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 J3QR06 171 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 LPLP06858 475 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 GNAO1P09471 354 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 IGFBP3P17936 291 aaPredicted RBP9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 GPR176Q14439 515 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 ATAD3CQ5T2N8 411 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 AHSA2Q719I0 299 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 STX19Q8N4C7 294 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 JAGN1Q8N5M9 183 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 OR5AU1Q8NGC0 362 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 OR10A7Q8NGE5 316 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 OR10X1Q8NGY0 326 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 OR56B4Q8NH76 319 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 OR14A2Q96R54 314 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 SPACA1Q9HBV2 294 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 ZNF581Q9P0T4 197 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 PSG11Q9UQ72 335 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 MOB4Q9Y3A3 225 aa9.87□□□□□ -0.83
CTDNEP1-205ENST00000570828 TRAV39A0A0B4J263 110 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 A0A1W2PRX2 142 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM229AH3BQW9 127 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 GPX5O75715 221 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 GZMHP20718 246 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 RPS11P62280 158 aaKnown RBP eCLIP9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 HES1Q14469 280 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 FBLN7Q53RD9 439 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 C9orf152Q5JTZ5 239 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 OGFRL1Q5TC84 451 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 AWAT2Q6E213 333 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 SLC16A12Q6ZSM3 486 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 CENPVQ7Z7K6 275 aaPredicted RBP9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 ZNF485Q8NCK3 441 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 OR4X2Q8NGF9 303 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 THRSPQ92748 146 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 MUL1Q969V5 352 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 PSORS1C1Q9UIG5 152 aa9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 MRPS28Q9Y2Q9 187 aaKnown RBP9.86□□□□□ -0.83
CTDNEP1-205ENST00000570828 TRBV5-7A0A0A0MS05 114 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 A0A1W2PP11 408 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 A0A1W2PPI3 338 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 A0A1W2PPK0 400 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 SH2D7A6NKC9 451 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 ADARB2-AS1A8MUL3 147 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 AIPO00170 330 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 CASQ2O14958 399 aaPredicted RBP9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 SNRNP70P08621 437 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 PF4V1P10720 104 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 CELP19835 753 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 RAB7AP51149 207 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 WNT4P56705 351 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 C21orf62-AS1Q17RA5 79 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 BEAN1Q3B7T3 259 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 KHDC1LQ5JSQ8 128 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 GLIPR1L1Q6UWM5 242 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 OR8H3Q8N146 312 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 DRAM1Q8N682 238 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 BPIFB6Q8NFQ5 453 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 ARL11Q969Q4 196 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 MRPS24Q96EL2 167 aaKnown RBP9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 DERL3Q96Q80 235 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 ERGIC3Q9Y282 383 aa9.85□□□□□ -0.83
CTDNEP1-205ENST00000570828 TCRBV4S1A1TA0A5B7 111 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM90A18PA6NE21 464 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM90A16PA6NEW6 464 aa9.84□□□□□ -0.83
CTDNEP1-205ENST00000570828 FAM90A20PA6NIJ5 464 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms