RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 TMEM30CPA0ZSE6 113 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 SAC3D1A6NKF1 404 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 J3QRE1 110 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 SDCBPO00560 298 aaPredicted RBP16.56■□□□□ 0.24
PKD1-240ENST00000570253 TXNL1O43396 289 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 CSTBP04080 98 aaKnown RBP16.56■□□□□ 0.24
PKD1-240ENST00000570253 CD2P06729 351 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 OR5H8P0DN80 308 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 REG1BP48304 166 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 GBX2P52951 348 aaPredicted RBP16.56■□□□□ 0.24
PKD1-240ENST00000570253 SNRPGP62308 76 aaKnown RBP16.56■□□□□ 0.24
PKD1-240ENST00000570253 GALEQ14376 348 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 OR8H1Q8NGG4 311 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 OR52M1Q8NGK5 317 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 NEK7Q8TDX7 302 aa16.56■□□□□ 0.24
PKD1-240ENST00000570253 CHCHD3Q9NX63 227 aaKnown RBP16.56■□□□□ 0.24
PKD1-240ENST00000570253 EXOGQ9Y2C4 368 aaKnown RBP16.56■□□□□ 0.24
PKD1-240ENST00000570253 GABRPO00591 440 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 OR7C1O76099 320 aaPredicted RBP16.55■□□□□ 0.24
PKD1-240ENST00000570253 FADS2O95864 444 aaKnown RBP16.55■□□□□ 0.24
PKD1-240ENST00000570253 MOSP00540 346 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 CD1BP29016 333 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 DEFB136Q30KP8 78 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 PIGYQ3MUY2 71 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 LINC00596Q86U02 117 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 SUMF2Q8NBJ7 301 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 OR10K1Q8NGX5 313 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 ARL11Q969Q4 196 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 METTL9Q9H1A3 318 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 PAK1IP1Q9NWT1 392 aaPredicted RBP16.55■□□□□ 0.24
PKD1-240ENST00000570253 ST3GAL6Q9Y274 331 aa16.55■□□□□ 0.24
PKD1-240ENST00000570253 LSM4Q9Y4Z0 139 aaKnown RBP16.55■□□□□ 0.24
PKD1-240ENST00000570253 CIB2O75838 187 aa16.54■□□□□ 0.24
PKD1-240ENST00000570253 LY86O95711 162 aa16.54■□□□□ 0.24
PKD1-240ENST00000570253 LHFPL3Q86UP9 236 aa16.54■□□□□ 0.24
PKD1-240ENST00000570253 STX19Q8N4C7 294 aa16.54■□□□□ 0.24
PKD1-240ENST00000570253 LINC00311Q8N616 119 aa16.54■□□□□ 0.24
PKD1-240ENST00000570253 C4orf3Q8WVX3 66 aa16.54■□□□□ 0.24
PKD1-240ENST00000570253 ZNF256Q9Y2P7 627 aaPredicted RBP16.54■□□□□ 0.24
PKD1-240ENST00000570253 SOX6P35712 828 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 INSL3P51460 131 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 ZNF260Q3ZCT1 412 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 Q3ZCU0 254 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 C8orf31Q8N9H6 132 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 Q8N9W7 124 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 Q8NFD4 153 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 LGALS12Q96DT0 336 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 Q96MT0 163 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 PDCD1LG2Q9BQ51 273 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 ING4Q9UNL4 249 aa16.53■□□□□ 0.24
PKD1-240ENST00000570253 TRAV39A0A0B4J263 110 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 LINC01548A6NM66 108 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 PPP3R1P63098 170 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 ATAD3CQ5T2N8 411 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 TMEM65Q6PI78 240 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 Q8N6K4 173 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 RNF152Q8N8N0 203 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 OR52N1Q8NH53 320 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 RTN4IP1Q8WWV3 396 aaPredicted RBP16.52■□□□□ 0.24
PKD1-240ENST00000570253 S1PR3Q99500 378 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 ASCL2Q99929 193 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 CHCHD6Q9BRQ6 235 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 IFT22Q9H7X7 185 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 GFOD1Q9NXC2 390 aa16.52■□□□□ 0.24
PKD1-240ENST00000570253 ORC5O43913 435 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 ZNF780AO75290 641 aaPredicted RBP16.51■□□□□ 0.23
PKD1-240ENST00000570253 ATP5HO75947 161 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 CHATP28329 748 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 RBM11P57052 281 aaKnown RBP16.51■□□□□ 0.23
PKD1-240ENST00000570253 MPV17LQ2QL34 196 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 TMEM30BQ3MIR4 351 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 NHLRC3Q5JS37 347 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 JAM3Q9BX67 310 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 ISG20L2Q9H9L3 353 aaKnown RBP16.51■□□□□ 0.23
PKD1-240ENST00000570253 TAS2R4Q9NYW5 299 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 GMPPBQ9Y5P6 360 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 SMAD5-AS1Q9Y6J3 95 aa16.51■□□□□ 0.23
PKD1-240ENST00000570253 AIPO00170 330 aa16.5■□□□□ 0.23
PKD1-240ENST00000570253 SPINT2O43291 252 aa16.5■□□□□ 0.23
PKD1-240ENST00000570253 IGHG4P01861 327 aa16.5■□□□□ 0.23
PKD1-240ENST00000570253 OR8U8P0C7N1 319 aa16.5■□□□□ 0.23
PKD1-240ENST00000570253 SOX2P48431 317 aa16.5■□□□□ 0.23
PKD1-240ENST00000570253 OR11H1Q8NG94 326 aa16.5■□□□□ 0.23
PKD1-240ENST00000570253 GPR148Q8TDV2 347 aa16.5■□□□□ 0.23
PKD1-240ENST00000570253 IL36GQ9NZH8 169 aa16.5■□□□□ 0.23
PKD1-240ENST00000570253 GNG12Q9UBI6 72 aa16.5■□□□□ 0.23
PKD1-240ENST00000570253 IGHV3-43A0A0B4J1X8 118 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 CDRT1O95170 752 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 ALPLP05186 524 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 IGHV3-43DP0DP04 118 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 SERPINA2P20848 420 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 ZNF93P35789 620 aaPredicted RBP16.49■□□□□ 0.23
PKD1-240ENST00000570253 RAB40BQ12829 278 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 ZIK1Q3SY52 487 aaPredicted RBP16.49■□□□□ 0.23
PKD1-240ENST00000570253 FAM27D1Q5T7N8 215 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 DDI2Q5TDH0 399 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 ASCL4Q6XD76 172 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 OR51A2Q8NGJ7 313 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 CCDC107Q8WV48 283 aa16.49■□□□□ 0.23
PKD1-240ENST00000570253 SPACA1Q9HBV2 294 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms