RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 N4BP2L1Q5TBK1 243 aaPredicted RBP3.37□□□□□ -1.87
CHD9-220ENST00000569794 NXNL2Q5VZ03 156 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 SCGB1D4Q6XE38 83 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 HIST2H3AQ71DI3 136 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 TMEM86BQ8N661 226 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 TMEM35BQ8NCS4 154 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 OR4M2Q8NGB6 313 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 MCFD2Q8NI22 146 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 TWIST2Q8WVJ9 160 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 TNFAIP8L1Q8WVP5 186 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 DCUN1D4Q92564 292 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 SLC35B4Q969S0 331 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 NEURL3Q96EH8 262 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 KCNS1Q96KK3 526 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 PLEKHF1Q96S99 279 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 TIMM17AQ99595 171 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 HSD17B10Q99714 261 aaKnown RBP3.37□□□□□ -1.87
CHD9-220ENST00000569794 PARP12Q9H0J9 701 aaKnown RBP3.37□□□□□ -1.87
CHD9-220ENST00000569794 BOLA2Q9H3K6 86 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 ZSCAN16Q9H4T2 348 aaPredicted RBP3.37□□□□□ -1.87
CHD9-220ENST00000569794 RBM12B-AS1Q9P1G2 102 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 DEC1Q9P2X7 70 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 PSG8Q9UQ74 426 aa3.37□□□□□ -1.87
CHD9-220ENST00000569794 UTP11Q9Y3A2 253 aaKnown RBP3.37□□□□□ -1.87
CHD9-220ENST00000569794 IGKV1-27A0A075B6S5 117 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 IGHV6-1A0A0B4J1U7 121 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 OR6C6A6NF89 314 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 CCDC22O60826 627 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 SERPINB7O75635 380 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 OR7C1O76099 320 aaPredicted RBP3.36□□□□□ -1.87
CHD9-220ENST00000569794 OR2A4O95047 310 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 IGHV3-23P01764 117 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 GUSBP08236 651 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 TDGF1P13385 188 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 PSMB1P20618 241 aaKnown RBP3.36□□□□□ -1.87
CHD9-220ENST00000569794 POLR2IP36954 125 aaKnown RBP3.36□□□□□ -1.87
CHD9-220ENST00000569794 MDH2P40926 338 aaKnown RBP3.36□□□□□ -1.87
CHD9-220ENST00000569794 OR1E2P47887 323 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 TDGF1P3P51864 188 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 SNAP25P60880 206 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 DAD1P61803 113 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 TIMM10P62072 90 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 C16orf72Q14CZ0 275 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 BATFQ16520 125 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 ACOT6Q3I5F7 207 aaPredicted RBP3.36□□□□□ -1.87
CHD9-220ENST00000569794 PYCR3Q53H96 274 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 ELP2Q6IA86 826 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 NEGR1Q7Z3B1 354 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 C6orf120Q7Z4R8 191 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 SLC35F6Q8N357 371 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 SMIM20Q8N5G0 67 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 ZNF676Q8N7Q3 588 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 TM4SF18Q96CE8 201 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 MRPL48Q96GC5 212 aaKnown RBP3.36□□□□□ -1.87
CHD9-220ENST00000569794 DIRAS2Q96HU8 199 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 C1orf147Q96MC9 270 aaPredicted RBP3.36□□□□□ -1.87
CHD9-220ENST00000569794 RNF157Q96PX1 679 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 OR2A7Q96R45 310 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 OR4K3Q96R72 315 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 C12orf10Q9HB07 376 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 BIN3Q9NQY0 253 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 NYAP2Q9P242 653 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 ZNF223Q9UK11 482 aaPredicted RBP3.36□□□□□ -1.87
CHD9-220ENST00000569794 POMPQ9Y244 141 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 BTRCQ9Y297 605 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 PKIGQ9Y2B9 76 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 UFC1Q9Y3C8 167 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 NEUROG3Q9Y4Z2 214 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 ZNF780BQ9Y6R6 833 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 PTPRKQ15262 1439 aa3.36□□□□□ -1.87
CHD9-220ENST00000569794 DENND4AQ7Z401 1863 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 SHROOM2Q13796 1616 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 GMNCA6NCL1 334 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 SERF1AO75920 110 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 ATG12O94817 140 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 CYB5R3P00387 301 aaPredicted RBP3.35□□□□□ -1.87
CHD9-220ENST00000569794 CA2P00918 260 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 ATP5G1P05496 136 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 CRHP06850 196 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 ZDHHC11BP0C7U3 371 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 CECR9P0C854 216 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 OR13C7P0DN81 318 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 ESDP10768 282 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 GNG3P63215 75 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 HIST1H3AP68431 136 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 CRADDP78560 199 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 H3F3AP84243 136 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 PRDX4Q13162 271 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 PNOCQ13519 176 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 PAFAH1B3Q15102 231 aaKnown RBP3.35□□□□□ -1.87
CHD9-220ENST00000569794 IRF4Q15306 451 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 SNRNP35Q16560 246 aaKnown RBP3.35□□□□□ -1.87
CHD9-220ENST00000569794 ZNF404Q494X3 552 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 CASC10Q5T4H9 136 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 ZNF773Q6PK81 442 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 DPPA2Q7Z7J5 298 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 PHF13Q86YI8 300 aaPredicted RBP3.35□□□□□ -1.87
CHD9-220ENST00000569794 DRAM1Q8N682 238 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 OR9I1Q8NGQ6 314 aa3.35□□□□□ -1.87
CHD9-220ENST00000569794 OR1J4Q8NGS1 313 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms