RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 GPR3P46089 330 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 HSD52Q0P140 79 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 PAPPA-AS1Q5QFB9 102 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 AMER3Q8N944 861 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 OR2K2Q8NGT1 345 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 ZNF48Q96MX3 618 aaPredicted RBP6.26□□□□□ -1.41
CNOT1-216ENST00000569240 TMEM208Q9BTX3 173 aa6.26□□□□□ -1.41
CNOT1-216ENST00000569240 A0A0U1RQV5 110 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 IDSB3KWA1 339 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 FGF17O60258 216 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 DDNO94850 711 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-216ENST00000569240 HOXC4P09017 264 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-216ENST00000569240 MAS1LP35410 378 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 PRTGQ2VWP7 1150 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 OR10W1Q8NGF6 305 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 HSD17B8Q92506 261 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 WSB2Q9NYS7 404 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-216ENST00000569240 ALOX12BO75342 701 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 CER1O95813 267 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 PPP1R17O96001 155 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 SP6Q3SY56 376 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 ANAPC13Q9BS18 74 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 EGLN1Q9GZT9 426 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 COL14A1Q05707 1796 aaKnown RBP6.25□□□□□ -1.41
CNOT1-216ENST00000569240 UMODP07911 640 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 COL8A1P27658 744 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 IBA57Q5T440 356 aaKnown RBP6.25□□□□□ -1.41
CNOT1-216ENST00000569240 RND1Q92730 232 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 PIAS3Q9Y6X2 628 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 H3BP45 60 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 TDGF1P3P51864 188 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 LTC4SQ16873 150 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 TCF24Q7RTU0 167 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 C10orf126Q8N4M7 172 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 KLK13Q9UKR3 277 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 TNFSF11O14788 317 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 TIMM8AO60220 97 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-216ENST00000569240 CD1BP29016 333 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 ZP4Q12836 540 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 ZIC1Q15915 447 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 C2orf27AQ580R0 203 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 ANKRD37Q7Z713 158 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 MMD2Q8IY49 270 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 FBXO17Q96EF6 278 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 BARX1Q9HBU1 254 aaPredicted RBP6.25□□□□□ -1.41
CNOT1-216ENST00000569240 A0A1B0GX78 115 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 RPL36A-HNRNPH2H7BZ11 118 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 ATRAIDQ6UW56 229 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 OR4X1Q8NH49 305 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 GPA33Q99795 319 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 SF3B5Q9BWJ5 86 aaKnown RBP6.25□□□□□ -1.41
CNOT1-216ENST00000569240 DHCR7Q9UBM7 475 aaKnown RBP6.25□□□□□ -1.41
CNOT1-216ENST00000569240 SMPXQ9UHP9 88 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 LY96Q9Y6Y9 160 aa6.25□□□□□ -1.41
CNOT1-216ENST00000569240 CAMPP49913 170 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 IP6K3Q96PC2 410 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 PLSCR2Q9NRY7 297 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 THYN1Q9P016 225 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 DUSP13Q9UII6 198 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 ERRFI1Q9UJM3 462 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 COL22A1Q8NFW1 1626 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 NGFRP08138 427 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 FAM157CP0CG43 387 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 PNLIPP16233 465 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 COL10A1Q03692 680 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 SAXO1Q8IYX7 474 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 A0A1W2PPC4 97 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 NKX2-6A6NCS4 301 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 ATP5LO75964 103 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 OR1D5P58170 312 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 LSM11P83369 360 aaKnown RBP eCLIP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 THSD4Q6ZMP0 1018 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 SSBP4Q9BWG4 385 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 C1QTNF9P0C862 333 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 GPR183P32249 361 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 ZNF324BQ6AW86 544 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 WDR31Q8NA23 367 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 C16orf52Q8NHV5 167 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 ZNF519Q8TB69 540 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 CHCHD1Q96BP2 118 aaKnown RBP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 C17orf51A8MQB3 221 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 CDC42EP2O14613 210 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 F11P03951 625 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 ZNF708P17019 499 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 ZFP36L2P47974 494 aaKnown RBP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 FOXL1Q12952 345 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 PRICKLE4Q2TBC4 344 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 LDLRAD2Q5SZI1 272 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 GBGT1Q8N5D6 347 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 C5orf17Q8NAS9 161 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 RPEQ96AT9 228 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 GNB1LQ9BYB4 327 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 PSG11Q9UQ72 335 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 CD5LO43866 347 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 FGF8P55075 233 aaPredicted RBP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 MRPL58Q14197 206 aaKnown RBP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 SCCPDHQ8NBX0 429 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 MRPL13Q9BYD1 178 aaKnown RBP6.24□□□□□ -1.41
CNOT1-216ENST00000569240 IGFLR1Q9H665 355 aa6.24□□□□□ -1.41
CNOT1-216ENST00000569240 SCN9AQ15858 1988 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms