RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 TSSK3Q96PN8 268 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 PHB2Q99623 299 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 MARVELD1Q9BSK0 173 aa3.9□□□□□ -1.79
UBR1-208ENST00000569066 STOX2Q9P2F5 926 aaPredicted RBP3.9□□□□□ -1.79
UBR1-208ENST00000569066 IQGAP1P46940 1657 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 MYO5AQ9Y4I1 1855 aaKnown RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 ATP7AQ04656 1500 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 KDM5AP29375 1690 aaKnown RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 QRICH2Q9H0J4 1663 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 KCNE1BA0A087WTH5 132 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 LOC102724200A0A096LPH7 203 aaPredicted RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 A0A1B0GUH1 482 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 TCRBV3S1A0A5B6 114 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 A6NDX4 124 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 OR5H14A6NHG9 310 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 CD5LO43866 347 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 OR2T1O43869 369 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 MFSD11O43934 449 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 RP2O75695 350 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 CD160O95971 181 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 UBCP0CG48 685 aaKnown RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 TDGF1P13385 188 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 AK4P27144 223 aaPredicted RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 GCLMP48507 274 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 NUDT2P50583 147 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 CDKN2DP55273 166 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 GABARAPL2P60520 117 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 TMEM255AQ5JRV8 349 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 C2orf73Q8N5S3 287 aaPredicted RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 LRRC52Q8N7C0 313 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 Q8N9W7 124 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 OR10AD1Q8NGE0 317 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 SMIM8Q96KF7 97 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 OR2V2Q96R30 315 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 HDHD3Q9BSH5 251 aaPredicted RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 TLNRD1Q9H1K6 362 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 METTL17Q9H7H0 456 aaPredicted RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 MRPL22Q9NWU5 206 aaKnown RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 MRM2Q9UI43 246 aaKnown RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 ZNF222Q9UK12 451 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 MYO5BQ9ULV0 1848 aa3.89□□□□□ -1.79
UBR1-208ENST00000569066 RIMS1Q86UR5 1692 aaKnown RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 TRPM3Q9HCF6 1732 aaPredicted RBP3.89□□□□□ -1.79
UBR1-208ENST00000569066 CLDN24A6NM45 220 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 F6UZH7 168 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 H3BN98 237 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 H7C417 338 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 CNIH1O95406 144 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 SERPINA1P01009 418 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 CXCL2P19875 107 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 KHDC3LQ587J8 217 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 LDLRAD2Q5SZI1 272 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 TRIQKQ629K1 86 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 DRAM2Q6UX65 266 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 LINC01551Q86U37 167 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 OR2M7Q8NG81 312 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 OR5B17Q8NGF7 314 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 OR9G4Q8NGQ1 327 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 OR10A6Q8NH74 314 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 LCN9Q8WX39 176 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 C8orf44Q96CB5 159 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 PORCNQ9H237 461 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 CST9LQ9H4G1 147 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 PXMP2Q9NR77 195 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 NLE1Q9NVX2 485 aaPredicted RBP3.88□□□□□ -1.79
UBR1-208ENST00000569066 USE1Q9NZ43 259 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 CARHSP1Q9Y2V2 147 aaKnown RBP3.88□□□□□ -1.79
UBR1-208ENST00000569066 URGCP-MRPS24S4R325 110 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 NESP48681 1621 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 CRYBG1Q9Y4K1 1723 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 KIF1BO60333 1816 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 CAMSAP1Q5T5Y3 1602 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 ANKRD20A5PA0PJZ0 165 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 RPL36A-HNRNPH2H7BZ11 118 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 UBFD1O14562 309 aaKnown RBP3.88□□□□□ -1.79
UBR1-208ENST00000569066 GNG7O60262 68 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 CLDN11O75508 207 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 OR56A5P0C7T3 313 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 SLC35E2BP0CK96 405 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 PSMB9P28065 219 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 NBL1P41271 181 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 RPS9P46781 194 aaKnown RBP3.88□□□□□ -1.79
UBR1-208ENST00000569066 RPS10P46783 165 aaKnown RBP3.88□□□□□ -1.79
UBR1-208ENST00000569066 RAB31Q13636 194 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 PSG3Q16557 428 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 SAMD13Q5VXD3 122 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 H3F3CQ6NXT2 135 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 TRAPPC5Q8IUR0 188 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 DAW1Q8N136 415 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 OR4S1Q8NGB4 309 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 OR56A4Q8NGH8 313 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 OR13C8Q8NGS7 320 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 CANT1Q8WVQ1 401 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 ASB17Q8WXJ9 295 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 ASB9Q96DX5 294 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 RNF185Q96GF1 192 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 ERMAPQ96PL5 475 aaPredicted RBP3.88□□□□□ -1.79
UBR1-208ENST00000569066 P2RX4Q99571 388 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 TPT1P8Q9HAU6 139 aa3.88□□□□□ -1.79
UBR1-208ENST00000569066 CHRAC1Q9NRG0 131 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms