RNA–Protein interactions for RNA: ENST00000569020.5

CNOT1-215, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-215ENST00000569020 SMPD3Q9NY59 655 aaPredicted RBP10.79□□□□□ -0.68
CNOT1-215ENST00000569020 TAS2R4Q9NYW5 299 aa10.79□□□□□ -0.68
CNOT1-215ENST00000569020 ING4Q9UNL4 249 aa10.79□□□□□ -0.68
CNOT1-215ENST00000569020 RPL36Q9Y3U8 105 aaKnown RBP10.79□□□□□ -0.68
CNOT1-215ENST00000569020 TRAV39A0A0B4J263 110 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 IGHV1-3A0A0C4DH29 117 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 NCBP2LA6PVI3 153 aaKnown RBP10.78□□□□□ -0.68
CNOT1-215ENST00000569020 CCRL2O00421 344 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 OR7C1O76099 320 aaPredicted RBP10.78□□□□□ -0.68
CNOT1-215ENST00000569020 CDRT1O95170 752 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 GTF2A1P52655 376 aaPredicted RBP10.78□□□□□ -0.68
CNOT1-215ENST00000569020 PPP3R1P63098 170 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 EBI3Q14213 229 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 CCDC58Q4VC31 144 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 TEX38Q6PEX7 206 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 ASCL4Q6XD76 172 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 C18orf65Q6ZTR6 163 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 LINC00596Q86U02 117 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 OR52I1Q8NGK6 324 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 OR52N1Q8NH53 320 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 TMEM106AQ96A25 262 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 B9D2Q9BPU9 175 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 GON7Q9BXV9 100 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 IFT22Q9H7X7 185 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 TMEM138Q9NPI0 162 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 LIN7CQ9NUP9 197 aaKnown RBP10.78□□□□□ -0.68
CNOT1-215ENST00000569020 PAK1IP1Q9NWT1 392 aaPredicted RBP10.78□□□□□ -0.68
CNOT1-215ENST00000569020 IL36GQ9NZH8 169 aa10.78□□□□□ -0.68
CNOT1-215ENST00000569020 TMEM30CPA0ZSE6 113 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 AP4M1O00189 453 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 SDCBPO00560 298 aaPredicted RBP10.77□□□□□ -0.69
CNOT1-215ENST00000569020 ZNF780AO75290 641 aaPredicted RBP10.77□□□□□ -0.69
CNOT1-215ENST00000569020 SERPINA2P20848 420 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 IL3RAP26951 378 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 ZNF93P35789 620 aaPredicted RBP10.77□□□□□ -0.69
CNOT1-215ENST00000569020 REG1BP48304 166 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 RBM11P57052 281 aaKnown RBP10.77□□□□□ -0.69
CNOT1-215ENST00000569020 RCN1Q15293 331 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 NHLRC3Q5JS37 347 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 ATAD3CQ5T2N8 411 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 DDI2Q5TDH0 399 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 RPL22L1Q6P5R6 122 aaKnown RBP10.77□□□□□ -0.69
CNOT1-215ENST00000569020 TGIF2LXQ8IUE1 241 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 ZNF695Q8IW36 515 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 IZUMO1Q8IYV9 350 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 OR52M1Q8NGK5 317 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 OR2T10Q8NGZ9 312 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 NEK7Q8TDX7 302 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 ARL11Q969Q4 196 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 EAF1Q96JC9 268 aaPredicted RBP10.77□□□□□ -0.69
CNOT1-215ENST00000569020 P2RX4Q99571 388 aa10.77□□□□□ -0.69
CNOT1-215ENST00000569020 MRPS18AQ9NVS2 196 aaKnown RBP10.77□□□□□ -0.69
CNOT1-215ENST00000569020 IGHV3-72A0A0B4J1Y9 119 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 GEMIN2O14893 280 aaKnown RBP10.76□□□□□ -0.69
CNOT1-215ENST00000569020 ORC5O43913 435 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 WBP4O75554 376 aaKnown RBP10.76□□□□□ -0.69
CNOT1-215ENST00000569020 BDKRB2P30411 391 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 GP2P55259 537 aaKnown RBP10.76□□□□□ -0.69
CNOT1-215ENST00000569020 DGCR2P98153 550 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 PNLIPRP3Q17RR3 467 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 LRRC36Q1X8D7 754 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 MPV17LQ2QL34 196 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 LINC00311Q8N616 119 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 C8orf31Q8N9H6 132 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 ZNF555Q8NEP9 628 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 RGP1Q92546 391 aaPredicted RBP10.76□□□□□ -0.69
CNOT1-215ENST00000569020 ABCG5Q9H222 651 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 ZNF581Q9P0T4 197 aa10.76□□□□□ -0.69
CNOT1-215ENST00000569020 LINC01548A6NM66 108 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 ANKRD65E5RJM6 399 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 H0YHG0 523 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 C15orf65H3BRN8 121 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 AIPO00170 330 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 CCL24O00175 119 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 RRP9O43818 475 aaKnown RBP10.75□□□□□ -0.69
CNOT1-215ENST00000569020 RAMP3O60896 148 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 LIMS3P0CW19 117 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 LIMS4P0CW20 117 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 CD1BP29016 333 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 GPR12P47775 334 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 RAB25P57735 213 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 SMN1Q16637 294 aaKnown RBP10.75□□□□□ -0.69
CNOT1-215ENST00000569020 CXorf66Q5JRM2 361 aaPredicted RBP10.75□□□□□ -0.69
CNOT1-215ENST00000569020 XAF1Q6GPH4 301 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 TMPRSS11AQ6ZMR5 421 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 STX19Q8N4C7 294 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 Q8N6K4 173 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 PACRGLQ8N7B6 248 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 Q8N9W7 124 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 OR8U1Q8NH10 309 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 CCDC107Q8WV48 283 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 RTN4IP1Q8WWV3 396 aaPredicted RBP10.75□□□□□ -0.69
CNOT1-215ENST00000569020 WWC2-AS2Q96NR7 200 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 DUX3Q96PT4 197 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 RASL11BQ9BPW5 248 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 DCLRE1BQ9H816 532 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 RAB9BQ9NP90 201 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 FGF20Q9NP95 211 aaPredicted RBP10.75□□□□□ -0.69
CNOT1-215ENST00000569020 C8orf4Q9NR00 106 aa10.75□□□□□ -0.69
CNOT1-215ENST00000569020 GFOD1Q9NXC2 390 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms