RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ADAD2Q8NCV1 583 aaKnown RBP12.31□□□□□ -0.44
COMMD4-221ENST00000567935 MRPL30Q8TCC3 161 aaKnown RBP12.31□□□□□ -0.44
COMMD4-221ENST00000567935 RDH5Q92781 318 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 RNASE6Q93091 150 aaKnown RBP12.31□□□□□ -0.44
COMMD4-221ENST00000567935 TMEM230Q96A57 120 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 CYYR1Q96J86 154 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 VRK1Q99986 396 aaPredicted RBP12.31□□□□□ -0.44
COMMD4-221ENST00000567935 SYT3Q9BQG1 590 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 TMEM165Q9HC07 324 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 TAAR3PQ9P1P4 343 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 PCDHB10Q9UN67 800 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 CADP27708 2225 aa12.31□□□□□ -0.44
COMMD4-221ENST00000567935 hCG_1807616A0A1W2PRN6 198 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 ZSCAN5BA6NJL1 495 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 NPIPB11E5RHQ5 1161 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 HS3ST1O14792 307 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 THBDP07204 575 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 ADH4P08319 380 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 SORDQ00796 357 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 PAX5Q02548 391 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 MSMPQ1L6U9 139 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 PRAMEF6Q5VXH4 476 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 ZNF497Q6ZNH5 498 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 SGPP2Q8IWX5 399 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 C9orf62Q8N4C0 152 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 CCDC71LQ8N9Z2 235 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 LILRB1Q8NHL6 650 aaPredicted RBP12.3□□□□□ -0.44
COMMD4-221ENST00000567935 MEGF10Q96KG7 1140 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 CABLES2Q9BTV7 478 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 ESRP2Q9H6T0 727 aaKnown RBP12.3□□□□□ -0.44
COMMD4-221ENST00000567935 RAB18Q9NP72 206 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 C1orf123Q9NWV4 160 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 NDRG3Q9UGV2 375 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 IL19Q9UHD0 177 aa12.3□□□□□ -0.44
COMMD4-221ENST00000567935 TMEM30CPA0ZSE6 113 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 DPRXA6NFQ7 191 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 DBX1A6NMT0 343 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 HMSDA8MTL9 139 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 SRRM5B3KS81 715 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 SMLR1H3BR10 107 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 ABCD4O14678 606 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 PPYP01298 95 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 IFNA2P01563 188 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 CD8AP01732 235 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 IGFBP2P18065 325 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 ZNF81P51508 661 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 H2BFSP57053 126 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 CYCSP99999 105 aaKnown RBP12.29□□□□□ -0.44
COMMD4-221ENST00000567935 ABCA11PQ4W5N1 156 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 SLC35E4Q6ICL7 350 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 VHLLQ6RSH7 139 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 Q6ZPA2 131 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 LRP11Q86VZ4 500 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 PPP1R35Q8TAP8 253 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 NINJ1Q92982 152 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 MRPL37Q9BZE1 423 aaKnown RBP12.29□□□□□ -0.44
COMMD4-221ENST00000567935 CHIAQ9BZP6 476 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 FXYD6Q9H0Q3 95 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 MBNL3Q9NUK0 354 aaKnown RBP12.29□□□□□ -0.44
COMMD4-221ENST00000567935 KCNIP3Q9Y2W7 256 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 WIPI2Q9Y4P8 454 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 HSPB11Q9Y547 144 aa12.29□□□□□ -0.44
COMMD4-221ENST00000567935 PIGBOS1A0A0B4J2F0 54 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 CRYM-AS1A6NIL9 109 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 G3V3Q6 166 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 SIRPB1O00241 398 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 HSPB6O14558 160 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 TUSC2O75896 110 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 CD55P08174 381 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 RPS2P15880 293 aaKnown RBP12.28□□□□□ -0.44
COMMD4-221ENST00000567935 RBMXP38159 391 aaKnown RBP12.28□□□□□ -0.44
COMMD4-221ENST00000567935 LY6G6FQ5SQ64 297 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 TRAT1Q6PIZ9 186 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 CLEC9AQ6UXN8 241 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 ZNF826PQ6ZT77 177 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 ASCC1Q8N9N2 400 aaKnown RBP12.28□□□□□ -0.44
COMMD4-221ENST00000567935 LILRB4Q8NHJ6 448 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 Q8TCH9 128 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 CASTOR1Q8WTX7 329 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 LRRC29Q8WV35 223 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 GALNT14Q96FL9 552 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 OR2V2Q96R30 315 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 TMEM246Q9BRR3 403 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 RSRP1Q9BUV0 290 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 LIME1Q9H400 295 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 UFSP2Q9NUQ7 469 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 COMMD9Q9P000 198 aa12.28□□□□□ -0.44
COMMD4-221ENST00000567935 TRBV6-7A0A0A0MS04 114 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 TEX13DA0A0J9YY54 714 aaPredicted RBP12.27□□□□□ -0.45
COMMD4-221ENST00000567935 AADACP22760 399 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 S100GP29377 79 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 RND3P61587 244 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 SUPT4H1P63272 117 aaKnown RBP12.27□□□□□ -0.45
COMMD4-221ENST00000567935 SRPXP78539 464 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 BSPH1Q075Z2 132 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 BAMBIQ13145 260 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 C2orf68Q2NKX9 166 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 NCMAPQ5T1S8 102 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 LAMTOR1Q6IAA8 161 aa12.27□□□□□ -0.45
COMMD4-221ENST00000567935 GSG1LQ6UXU4 331 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms