RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 RPEQ96AT9 228 aa8.97□□□□□ -0.97
CDH3-206ENST00000567674 OR4F4Q96R69 305 aa8.97□□□□□ -0.97
CDH3-206ENST00000567674 NR1H4Q96RI1 486 aaPredicted RBP8.97□□□□□ -0.97
CDH3-206ENST00000567674 OCSTAMPQ9BR26 566 aa8.97□□□□□ -0.97
CDH3-206ENST00000567674 CST11Q9H112 138 aa8.97□□□□□ -0.97
CDH3-206ENST00000567674 GHITMQ9H3K2 345 aa8.97□□□□□ -0.97
CDH3-206ENST00000567674 ZNF286AQ9HBT8 521 aa8.97□□□□□ -0.97
CDH3-206ENST00000567674 KIF25Q9UIL4 384 aa8.97□□□□□ -0.97
CDH3-206ENST00000567674 PSG11Q9UQ72 335 aa8.97□□□□□ -0.97
CDH3-206ENST00000567674 MRPS28Q9Y2Q9 187 aaKnown RBP8.97□□□□□ -0.97
CDH3-206ENST00000567674 GEMIN2O14893 280 aaKnown RBP8.96□□□□□ -0.98
CDH3-206ENST00000567674 SPINT2O43291 252 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 FBXO24O75426 580 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 CDRT1O95170 752 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 MT-ND4P03905 459 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 GAPDHP04406 335 aaKnown RBP8.96□□□□□ -0.98
CDH3-206ENST00000567674 CALCBP10092 127 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 IL3RAP26951 378 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 GLP1RP43220 463 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 RAB13P51153 203 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 PSMD7P51665 324 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 ZNF137PP52743 207 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 SLC35A2P78381 396 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 SRSF4Q08170 494 aaKnown RBP8.96□□□□□ -0.98
CDH3-206ENST00000567674 PIGYQ3MUY2 71 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 COMMD1Q8N668 190 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 OR13A1Q8NGR1 328 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 OR14A2Q96R54 314 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 ANKRD60Q9BZ19 345 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 PPIL3Q9H2H8 161 aaKnown RBP8.96□□□□□ -0.98
CDH3-206ENST00000567674 DUSP21Q9H596 190 aa8.96□□□□□ -0.98
CDH3-206ENST00000567674 MBNL3Q9NUK0 354 aaKnown RBP8.96□□□□□ -0.98
CDH3-206ENST00000567674 C15orf65H3BRN8 121 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 MRPS14O60783 128 aaKnown RBP8.95□□□□□ -0.98
CDH3-206ENST00000567674 ARL6IP5O75915 188 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 SRMP19623 302 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 SERPINA2P20848 420 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 MYF6P23409 242 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 VDAC2P45880 294 aaPredicted RBP8.95□□□□□ -0.98
CDH3-206ENST00000567674 HTD2P86397 168 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 GABPB1Q06547 395 aaPredicted RBP8.95□□□□□ -0.98
CDH3-206ENST00000567674 TPBGQ13641 420 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 SLC22A6Q4U2R8 563 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 ACSM3Q53FZ2 586 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 C1orf100Q5SVJ3 147 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 AWAT2Q6E213 333 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 GLIPR1L1Q6UWM5 242 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 REC114Q7Z4M0 266 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 JAGN1Q8N5M9 183 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 OR10X1Q8NGY0 326 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 KCNG3Q8TAE7 436 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 PLPPR1Q8TBJ4 325 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 TOMM40LQ969M1 308 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 CHCHD6Q9BRQ6 235 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 GON7Q9BXV9 100 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 RIMS4Q9H426 269 aaPredicted RBP8.95□□□□□ -0.98
CDH3-206ENST00000567674 MOB4Q9Y3A3 225 aa8.95□□□□□ -0.98
CDH3-206ENST00000567674 TRAV8-7A0A075B6U6 113 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 AIPO00170 330 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 UCHL1P09936 223 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 NFYBP25208 207 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 CD1BP29016 333 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 LOXL3P58215 753 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 CD83Q01151 205 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 IRF3Q14653 427 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 ATAD3CQ5T2N8 411 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 KPRPQ5T749 579 aaPredicted RBP8.94□□□□□ -0.98
CDH3-206ENST00000567674 PRSS48Q7RTY5 328 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 WFDC9Q8NEX5 89 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 OR10K1Q8NGX5 313 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 MRGPRDQ8TDS7 321 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 UFD1Q92890 307 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 ARL11Q969Q4 196 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 Q96M66 194 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 NKX3-1Q99801 234 aaPredicted RBP8.94□□□□□ -0.98
CDH3-206ENST00000567674 SLC25A33Q9BSK2 321 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 CENPOQ9BU64 300 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 GFOD1Q9NXC2 390 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 BLOC1S6Q9UL45 172 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 MGAT4AQ9UM21 535 aa8.94□□□□□ -0.98
CDH3-206ENST00000567674 LSM2Q9Y333 95 aaKnown RBP8.94□□□□□ -0.98
CDH3-206ENST00000567674 TET2Q6N021 2002 aaPredicted RBP8.93□□□□□ -0.98
CDH3-206ENST00000567674 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
CDH3-206ENST00000567674 PIN1P1O15428 100 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 PDCD6O75340 191 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 RGS11O94810 467 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 DUS4LO95620 317 aaKnown RBP8.93□□□□□ -0.98
CDH3-206ENST00000567674 VSIG10L2P0DP72 767 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 MGMTP16455 207 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 GALP22466 123 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 GDNFP39905 211 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 BLCAPP62952 87 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 MLLT11Q13015 90 aaPredicted RBP8.93□□□□□ -0.98
CDH3-206ENST00000567674 FBLN7Q53RD9 439 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 ARSJQ5FYB0 599 aaPredicted RBP8.93□□□□□ -0.98
CDH3-206ENST00000567674 RBM48Q5RL73 367 aaKnown RBP8.93□□□□□ -0.98
CDH3-206ENST00000567674 RAB12Q6IQ22 244 aa8.93□□□□□ -0.98
CDH3-206ENST00000567674 SLC25A48Q6ZT89 311 aaKnown RBP8.93□□□□□ -0.98
CDH3-206ENST00000567674 CENPVQ7Z7K6 275 aaPredicted RBP8.93□□□□□ -0.98
CDH3-206ENST00000567674 TMEM219Q86XT9 240 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms