RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 RIPK1Q13546 671 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 HES1Q14469 280 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 Q499Y3 187 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 FAM53AQ6NSI3 398 aaPredicted RBP14.52□□□□□ -0.09
USB1-213ENST00000566292 LINC00596Q86U02 117 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 OR8H3Q8N146 312 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 C5orf56Q8N8D9 126 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 OR10X1Q8NGY0 326 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 UBALD1Q8TB05 177 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 GGHQ92820 318 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 TMEM80Q96HE8 168 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 S100A13Q99584 98 aa14.52□□□□□ -0.09
USB1-213ENST00000566292 PAK1IP1Q9NWT1 392 aaPredicted RBP14.52□□□□□ -0.09
USB1-213ENST00000566292 PF4P02776 101 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 TMEM11P17152 192 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 GZMHP20718 246 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 LOXL3P58215 753 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 HNF4GQ14541 408 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 MPV17LQ2QL34 196 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 SLC22A6Q4U2R8 563 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 YIF1BQ5BJH7 314 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 KHDC1LQ5JSQ8 128 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 ATAD3CQ5T2N8 411 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 TTC23Q5W5X9 447 aa14.51□□□□□ -0.09
USB1-213ENST00000566292 TRBV5-7A0A0A0MS05 114 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 PSMB11A5LHX3 300 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 HSD17B6O14756 317 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 FGF16O43320 207 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 ZNF780AO75290 641 aaPredicted RBP14.5□□□□□ -0.09
USB1-213ENST00000566292 IGKV1D-33P01593 117 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 IGKV1-33P01594 117 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 FSTP19883 344 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 ZNF816Q0VGE8 651 aaPredicted RBP14.5□□□□□ -0.09
USB1-213ENST00000566292 ZNF497Q6ZNH5 498 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 ZNF329Q86UD4 541 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 SETD9Q8NE22 299 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 CCDC107Q8WV48 283 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 ARL11Q969Q4 196 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 NOL4LQ96MY1 436 aaPredicted RBP14.5□□□□□ -0.09
USB1-213ENST00000566292 GFOD1Q9NXC2 390 aa14.5□□□□□ -0.09
USB1-213ENST00000566292 IGHV3-43A0A0B4J1X8 118 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 IGHV1-3A0A0C4DH29 117 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 A0A1W2PPK0 400 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 MT-ND4P03905 459 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 IGHV3-43DP0DP04 118 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 GTF2F2P13984 249 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 REG1BP48304 166 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 ST3GAL4Q11206 333 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 DOC2BQ14184 412 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 LAIR2Q6ISS4 152 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 DHRSXQ8N5I4 330 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 LINC00311Q8N616 119 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 PACRGLQ8N7B6 248 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 OR52M1Q8NGK5 317 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 NEK7Q8TDX7 302 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 MUL1Q969V5 352 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 OR14A2Q96R54 314 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 CHCHD3Q9NX63 227 aaKnown RBP14.49□□□□□ -0.09
USB1-213ENST00000566292 RCC2Q9P258 522 aaKnown RBP14.49□□□□□ -0.09
USB1-213ENST00000566292 CKLFQ9UBR5 152 aa14.49□□□□□ -0.09
USB1-213ENST00000566292 IGHV3-72A0A0B4J1Y9 119 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 PNMA8CA0A1B0GUJ8 204 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 CCRL2O00421 344 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 SDCBPO00560 298 aaPredicted RBP14.48□□□□□ -0.09
USB1-213ENST00000566292 ORC5O43913 435 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 GAPDHP04406 335 aaKnown RBP14.48□□□□□ -0.09
USB1-213ENST00000566292 SLC35A2P78381 396 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 MED21Q13503 144 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 EBI3Q14213 229 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 GLIPR1L1Q6UWM5 242 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 ETV3LQ6ZN32 361 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 CYYR1Q96J86 154 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 LINC00527Q9UJ94 153 aa14.48□□□□□ -0.09
USB1-213ENST00000566292 MRPS28Q9Y2Q9 187 aaKnown RBP14.48□□□□□ -0.09
USB1-213ENST00000566292 AIPO00170 330 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 IGHG2P01859 326 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 GNAO1P09471 354 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 GPR176Q14439 515 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 C18orf65Q6ZTR6 163 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 MOB3BQ86TA1 216 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 LYPD6Q86Y78 171 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 JAGN1Q8N5M9 183 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 Q8N6K4 173 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 LINC00482Q8N8I6 264 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 C8orf31Q8N9H6 132 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 CHPT1Q8WUD6 406 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 ST6GALNAC6Q969X2 333 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 RCC1LQ96I51 464 aaKnown RBP14.47□□□□□ -0.09
USB1-213ENST00000566292 EAF1Q96JC9 268 aaPredicted RBP14.47□□□□□ -0.09
USB1-213ENST00000566292 C8orf4Q9NR00 106 aa14.47□□□□□ -0.09
USB1-213ENST00000566292 LINC01548A6NM66 108 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 SERPINE3A8MV23 424 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 C12orf77C9JDV5 145 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 SLC31A2O15432 143 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 MAS1P04201 325 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 TAS2R43P59537 309 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 RPL23AP62750 156 aaKnown RBP14.46□□□□□ -0.09
USB1-213ENST00000566292 RCN1Q15293 331 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 SLC35E3Q7Z769 313 aa14.46□□□□□ -0.09
USB1-213ENST00000566292 IZUMO1Q8IYV9 350 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms