RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 HMGN3Q15651 99 aa16.39■□□□□ 0.21
CLN6-205ENST00000564846 LILRB1Q8NHL6 650 aaPredicted RBP16.39■□□□□ 0.21
CLN6-205ENST00000564846 KIRREL1Q96J84 757 aa16.39■□□□□ 0.21
CLN6-205ENST00000564846 DBX1A6NMT0 343 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 DEFB108AA8MXU0 73 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 SIAH2O43255 324 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 RGS11O94810 467 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 PLAUP00749 431 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 IFNA2P01563 188 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 TFF1P04155 84 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 RBMXP38159 391 aaKnown RBP16.38■□□□□ 0.21
CLN6-205ENST00000564846 GABRA2P47869 451 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 SLC9A3R2Q15599 337 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 MST1LQ2TV78 715 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 KRBOX4Q5JUW0 171 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 LY6G6FQ5SQ64 297 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 DCAF12L2Q5VW00 463 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 KCTD9Q7L273 389 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 ANGPTL6Q8NI99 470 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 COQ2Q96H96 371 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 SNX22Q96L94 193 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 TMEM204Q9BSN7 226 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 SAP30LQ9HAJ7 183 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 TAF9BQ9HBM6 251 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 KIF25Q9UIL4 384 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 NBASA2RRP1 2371 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 IGHV3OR15-7A0A075B7D8 119 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 TEX13DA0A0J9YY54 714 aaPredicted RBP16.38■□□□□ 0.21
CLN6-205ENST00000564846 OOEPA6NGQ2 149 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 CD80P33681 288 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 ZNF672Q499Z4 452 aaPredicted RBP16.38■□□□□ 0.21
CLN6-205ENST00000564846 H1FOOQ8IZA3 346 aaPredicted RBP16.38■□□□□ 0.21
CLN6-205ENST00000564846 CCDC71LQ8N9Z2 235 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 SLC2A9Q9NRM0 540 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 KCNIP3Q9Y2W7 256 aa16.38■□□□□ 0.21
CLN6-205ENST00000564846 TRAV39A0A0B4J263 110 aa16.37■□□□□ 0.21
CLN6-205ENST00000564846 ZG16O60844 167 aa16.37■□□□□ 0.21
CLN6-205ENST00000564846 CYB5R3P00387 301 aaPredicted RBP16.37■□□□□ 0.21
CLN6-205ENST00000564846 SRSF4Q08170 494 aaKnown RBP16.37■□□□□ 0.21
CLN6-205ENST00000564846 FAM185AQ8N0U4 392 aa16.37■□□□□ 0.21
CLN6-205ENST00000564846 ZNF565Q8N9K5 539 aa16.37■□□□□ 0.21
CLN6-205ENST00000564846 ITLN2Q8WWU7 325 aaPredicted RBP16.37■□□□□ 0.21
CLN6-205ENST00000564846 RTN4IP1Q8WWV3 396 aaPredicted RBP16.37■□□□□ 0.21
CLN6-205ENST00000564846 IL1F10Q8WWZ1 152 aa16.37■□□□□ 0.21
CLN6-205ENST00000564846 OR2W1Q9Y3N9 320 aa16.37■□□□□ 0.21
CLN6-205ENST00000564846 G3V3Q6 166 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 MGST3O14880 152 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 MUC1P15941 1255 aaPredicted RBP16.36■□□□□ 0.21
CLN6-205ENST00000564846 LOXP28300 417 aaPredicted RBP16.36■□□□□ 0.21
CLN6-205ENST00000564846 ANKRD55Q3KP44 614 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 C6orf183Q5T699 404 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 TEX36Q5VZQ5 186 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 STUMQ69YW2 141 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 ZCCHC24Q8N2G6 241 aaKnown RBP16.36■□□□□ 0.21
CLN6-205ENST00000564846 ZNF561Q8N587 486 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 OR11H4Q8NGC9 324 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 NAA60Q9H7X0 242 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 RAB18Q9NP72 206 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 K7N7A8 449 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 GNRHRP30968 328 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 PHLDA2Q53GA4 152 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 FAM201AQ5SY85 155 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 TRAT1Q6PIZ9 186 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 C1orf87Q8N0U7 546 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 PRR18Q8N4B5 295 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 GALNT14Q96FL9 552 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 SDSLQ96GA7 329 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 LURAP1Q96LR2 239 aa16.36■□□□□ 0.21
CLN6-205ENST00000564846 ADGRG4Q8IZF6 3080 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 GLIPR1P48060 266 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 SWI5Q1ZZU3 235 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 Q5BKY6 102 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 MUC15Q8N387 334 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 SECTM1Q8WVN6 248 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 GALMQ96C23 342 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 WDR89Q96FK6 387 aaPredicted RBP16.35■□□□□ 0.21
CLN6-205ENST00000564846 PDCD10Q9BUL8 212 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 SLC5A7Q9GZV3 580 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 OR1A1Q9P1Q5 309 aa16.35■□□□□ 0.21
CLN6-205ENST00000564846 C12orf77C9JDV5 145 aa16.34■□□□□ 0.21
CLN6-205ENST00000564846 GPR31O00270 319 aa16.34■□□□□ 0.21
CLN6-205ENST00000564846 HEXAP06865 529 aa16.34■□□□□ 0.21
CLN6-205ENST00000564846 RND3P61587 244 aa16.34■□□□□ 0.21
CLN6-205ENST00000564846 SNRPD2P62316 118 aaKnown RBP16.34■□□□□ 0.21
CLN6-205ENST00000564846 C9orf62Q8N4C0 152 aa16.34■□□□□ 0.21
CLN6-205ENST00000564846 ZBTB8BQ8NAP8 495 aaPredicted RBP16.34■□□□□ 0.21
CLN6-205ENST00000564846 OR5D13Q8NGL4 314 aa16.34■□□□□ 0.21
CLN6-205ENST00000564846 VRK1Q99986 396 aaPredicted RBP16.34■□□□□ 0.21
CLN6-205ENST00000564846 DNTTIP1Q9H147 329 aa16.34■□□□□ 0.21
CLN6-205ENST00000564846 MAB21L2Q9Y586 359 aa16.34■□□□□ 0.21
CLN6-205ENST00000564846 ICE1Q9Y2F5 2266 aa16.34■□□□□ 0.21
CLN6-205ENST00000564846 CCSO14618 274 aa16.33■□□□□ 0.21
CLN6-205ENST00000564846 HSPA12AO43301 675 aa16.33■□□□□ 0.21
CLN6-205ENST00000564846 SNAPC5O75971 98 aa16.33■□□□□ 0.21
CLN6-205ENST00000564846 CD8AP01732 235 aa16.33■□□□□ 0.21
CLN6-205ENST00000564846 FGL1Q08830 312 aa16.33■□□□□ 0.21
CLN6-205ENST00000564846 EDDM3AQ14507 147 aa16.33■□□□□ 0.21
CLN6-205ENST00000564846 LAMTOR1Q6IAA8 161 aa16.33■□□□□ 0.21
CLN6-205ENST00000564846 GSG1LQ6UXU4 331 aa16.33■□□□□ 0.21
CLN6-205ENST00000564846 ZNRF1Q8ND25 227 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms