RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 FGF23Q9GZV9 251 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 SHARPINQ9H0F6 387 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 LIME1Q9H400 295 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 NAA60Q9H7X0 242 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 Q9N2K0 584 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF581Q9P0T4 197 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 NUP50Q9UKX7 468 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 A8MXK9 166 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 AHRRA9YTQ3 701 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 PAGE4O60829 102 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 FGF2P09038 288 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 HOXB5P09067 269 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 CEACAM1P13688 526 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 SELEP16581 610 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 HERV-K104P61576 105 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 TMEM187Q14656 261 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 ATXN7L3Q14CW9 347 aaPredicted RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 OR2A2Q6IF42 318 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 BAP18Q8IXM2 172 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 Q8IYB0 196 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 NHLRC2Q8NBF2 726 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 MISP3Q96FF7 219 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 MARS2Q96GW9 593 aaKnown RBP6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 MICU1Q9BPX6 476 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 SLC2A9Q9NRM0 540 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 TREM2Q9NZC2 230 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 SHANK1Q9Y566 2161 aa6.18□□□□□ -1.42
HERPUD1-209ENST00000564678 FAM186AA6NE01 2351 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 PIGBOS1A0A0B4J2F0 54 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 MPTX1A8MV57 137 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 J3QT63 122 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 PPYP01298 95 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 ACAA1P09110 424 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF250P15622 560 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 CBR1P16152 277 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 ZP3P21754 424 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 IGHV1-2P23083 117 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 EIF2S3P41091 472 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 RND3P61587 244 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 SRPXP78539 464 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 SMCO1Q147U7 214 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 RTP5Q14D33 572 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 GABRA6Q16445 453 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 IAH1Q2TAA2 248 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 BEX5Q5H9J7 111 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 HAGHLQ6PII5 290 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 C1orf174Q8IYL3 243 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 LGI3Q8N145 548 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 FAM58AQ8N1B3 248 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 Q8NA96 180 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 TOMM40LQ969M1 308 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 RTL8AQ9BWD3 113 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 OR51I2Q9H344 312 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 CDH20Q9HBT6 801 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 GSKIPQ9P0R6 139 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF629Q9UEG4 869 aaPredicted RBP6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 TMED3Q9Y3Q3 217 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 PTPRBP23467 1997 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 LRP5LA4QPB2 252 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 TRDCB7Z8K6 153 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 H7C1Q1 480 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 SYNGR1O43759 233 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 CRYZL1O95825 349 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 COX5AP20674 150 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 IL32P24001 234 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 C19orf54Q5BKX5 351 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 GGNBP1Q5YKI7 109 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 OR2T2Q6IF00 324 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 EIF5AL1Q6IS14 154 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 IGFL3Q6UXB1 125 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 GLYATL2Q8WU03 294 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 DYRK2Q92630 601 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 MSI2Q96DH6 328 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 RRNAD1Q96FB5 475 aaKnown RBP6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 CXorf58Q96LI9 332 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 TRIB1Q96RU8 372 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 CYTL1Q9NRR1 136 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 OR5AC2Q9NZP5 309 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 POLDIP2Q9Y2S7 368 aa6.17□□□□□ -1.42
HERPUD1-209ENST00000564678 CUL9Q8IWT3 2517 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 IQCF6A8MYZ5 107 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 MPPED1O15442 326 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 FGF16O43320 207 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 DEDDO75618 318 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 TGFAP01135 160 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 IGKV3-15P01624 115 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 OR5AC1P0C628 307 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 GLI4P10075 376 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 PRKACAP17612 351 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 WT1P19544 449 aaPredicted RBP6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 AADACP22760 399 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 CA6P23280 308 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 MDH2P40926 338 aaKnown RBP6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 KIR2DL2P43627 348 aaPredicted RBP6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 KCNJ3P48549 501 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 UCP2P55851 309 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 FXYD4P59646 89 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 PPP1CBP62140 327 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 SHEQ5VZ18 495 aa6.16□□□□□ -1.42
HERPUD1-209ENST00000564678 ZNF880Q6PDB4 577 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms