RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PXT1Q8NFP0 134 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 OR51A2Q8NGJ7 313 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 OR5D14Q8NGL3 314 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 RAX2Q96IS3 184 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 MYCBPQ99417 103 aaPredicted RBP13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 PDCD1LG2Q9BQ51 273 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 MCRIP2Q9BUT9 160 aaKnown RBP13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 BARHL1Q9BZE3 327 aa13.22□□□□□ -0.29
HDGFL3-203ENST00000563404 DYNC2H1Q8NCM8 4307 aaKnown RBP13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 RAB40BQ12829 278 aa13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 EBI3Q14213 229 aa13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 IL13RA2Q14627 380 aa13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 C6orf141Q5SZD1 244 aa13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 FAM53AQ6NSI3 398 aaPredicted RBP13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 ZNF695Q8IW36 515 aa13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 Q8N6K4 173 aa13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 Q8NFD4 153 aa13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 HAVCR2Q8TDQ0 301 aa13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 TNFAIP8L1Q8WVP5 186 aa13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 RBMXL1Q96E39 390 aaKnown RBP13.21□□□□□ -0.29
HDGFL3-203ENST00000563404 IGHV3-72A0A0B4J1Y9 119 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 HSD17B6O14756 317 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 SLC6A1P30531 599 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 REG1BP48304 166 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 DGCR2P98153 550 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 ZNF816Q0VGE8 651 aaPredicted RBP13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 ASCL4Q6XD76 172 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 LCNL1Q6ZST4 164 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 SYS1Q8N2H4 156 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 OR10A7Q8NGE5 316 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 OR10X1Q8NGY0 326 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 RGP1Q92546 391 aaPredicted RBP13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 EAF1Q96JC9 268 aaPredicted RBP13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 JAM3Q9BX67 310 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 YTHDF1Q9BYJ9 559 aaKnown RBP13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 CNOT2Q9NZN8 540 aaKnown RBP13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 DHDHQ9UQ10 334 aa13.2□□□□□ -0.3
HDGFL3-203ENST00000563404 IGHV1-3A0A0C4DH29 117 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 EFCAB10A6NFE3 127 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 TMEM212A6NML5 194 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 FADS2O95864 444 aaKnown RBP13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 RPLP1P05386 114 aaKnown RBP13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 GPR12P47775 334 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 SLC35B1P78383 322 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 MED21Q13503 144 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 DEFB136Q30KP8 78 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 LAIR2Q6ISS4 152 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 SLC16A12Q6ZSM3 486 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 MOB3BQ86TA1 216 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 SATL1Q86VE3 508 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 COMMD1Q8N668 190 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 Q8N9W7 124 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 SUMF2Q8NBJ7 301 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 OR5AK2Q8NH90 309 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 UBALD1Q8TB05 177 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 DPCDQ9BVM2 203 aaPredicted RBP13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 FGF20Q9NP95 211 aaPredicted RBP13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 PLSCR3Q9NRY6 295 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 ERVK13-1Q9NX77 482 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 TAS2R4Q9NYW5 299 aa13.19□□□□□ -0.3
HDGFL3-203ENST00000563404 C15orf65H3BRN8 121 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 CCL24O00175 119 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 CCRL2O00421 344 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 CDRT1O95170 752 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 HTR3BO95264 441 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 RAB3AP20336 220 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 DCKP27707 260 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 SOX2P48431 317 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 KCNJ3P48549 501 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 LUMP51884 338 aaPredicted RBP13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 RSU1Q15404 277 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 NKAPLQ5M9Q1 402 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 UNQ9370/PRO34162Q6UXP9 181 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 TGIF2LXQ8IUE1 241 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 FOXRED2Q8IWF2 684 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 TSEN15Q8WW01 171 aaKnown RBP13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 GPER1Q99527 375 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 FAM192AQ9GZU8 254 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 ABCG5Q9H222 651 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 AMBNQ9NP70 447 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 SCN3BQ9NY72 215 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 PSORS1C1Q9UIG5 152 aa13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 LSM4Q9Y4Z0 139 aaKnown RBP13.18□□□□□ -0.3
HDGFL3-203ENST00000563404 NCBP2LA6PVI3 153 aaKnown RBP13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 GAPDHP04406 335 aaKnown RBP13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 GTF2A1P52655 376 aaPredicted RBP13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 RAB25P57735 213 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 SMN1Q16637 294 aaKnown RBP13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 PNLIPRP3Q17RR3 467 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 RBM48Q5RL73 367 aaKnown RBP13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 RNLSQ5VYX0 342 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 TEX38Q6PEX7 206 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 IZUMO1Q8IYV9 350 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 TMEM104Q8NE00 496 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 ST6GALNAC6Q969X2 333 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 MRPL48Q96GC5 212 aaKnown RBP13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 CNBD2Q96M20 576 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 IFT22Q9H7X7 185 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 FKBP14Q9NWM8 211 aa13.17□□□□□ -0.3
HDGFL3-203ENST00000563404 ST3GAL6Q9Y274 331 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms