RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 IFT22Q9H7X7 185 aa13.7□□□□□ -0.22
TSC2-219ENST00000563346 IL36GQ9NZH8 169 aa13.7□□□□□ -0.22
TSC2-219ENST00000563346 ZNF581Q9P0T4 197 aa13.7□□□□□ -0.22
TSC2-219ENST00000563346 LINC00527Q9UJ94 153 aa13.7□□□□□ -0.22
TSC2-219ENST00000563346 IRGMA1A4Y4 181 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 CCRL2O00421 344 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 SDCBPO00560 298 aaPredicted RBP13.69□□□□□ -0.22
TSC2-219ENST00000563346 GEMIN2O14893 280 aaKnown RBP13.69□□□□□ -0.22
TSC2-219ENST00000563346 MYL12AP19105 171 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 DCKP27707 260 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 HOXD3P31249 432 aaPredicted RBP13.69□□□□□ -0.22
TSC2-219ENST00000563346 REG1BP48304 166 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 ETV1P50549 477 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 KRTAP10-11P60412 298 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 ZNF816Q0VGE8 651 aaPredicted RBP13.69□□□□□ -0.22
TSC2-219ENST00000563346 SMN1Q16637 294 aaKnown RBP13.69□□□□□ -0.22
TSC2-219ENST00000563346 MPV17LQ2QL34 196 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 NHLRC3Q5JS37 347 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 OR2G6Q5TZ20 316 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 MRPL41Q8IXM3 137 aaKnown RBP13.69□□□□□ -0.22
TSC2-219ENST00000563346 CCDC107Q8WV48 283 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 ARL11Q969Q4 196 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 ZFP57Q9NU63 452 aa13.69□□□□□ -0.22
TSC2-219ENST00000563346 IGHV1-3A0A0C4DH29 117 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 NCBP2LA6PVI3 153 aaKnown RBP13.68□□□□□ -0.22
TSC2-219ENST00000563346 ZNF780AO75290 641 aaPredicted RBP13.68□□□□□ -0.22
TSC2-219ENST00000563346 BAG2O95816 211 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 IL3RAP26951 378 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 THBS3P49746 956 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 RIPK1Q13546 671 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 SLC22A6Q4U2R8 563 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 C8orf86Q6ZUL3 223 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 OR2W3Q7Z3T1 314 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 STX19Q8N4C7 294 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 COMMD1Q8N668 190 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 KLHL30-AS1Q8NEE0 82 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 OR52M1Q8NGK5 317 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 SMIM19Q96E16 107 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 MCRIP2Q9BUT9 160 aaKnown RBP13.68□□□□□ -0.22
TSC2-219ENST00000563346 BABAM2Q9NXR7 383 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 SMPD3Q9NY59 655 aaPredicted RBP13.68□□□□□ -0.22
TSC2-219ENST00000563346 CKLFQ9UBR5 152 aa13.68□□□□□ -0.22
TSC2-219ENST00000563346 IGHV3-72A0A0B4J1Y9 119 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 WI2-2373I1.2A0A1W2PRP0 233 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 WBP4O75554 376 aaKnown RBP13.67□□□□□ -0.22
TSC2-219ENST00000563346 IGHG2P01859 326 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 GTF2F2P13984 249 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 SLC6A1P30531 599 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 ETV3LQ6ZN32 361 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 STPG2Q8N412 459 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 OR2T10Q8NGZ9 312 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 UBALD1Q8TB05 177 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 ORAI1Q96D31 301 aa13.67□□□□□ -0.22
TSC2-219ENST00000563346 EAF1Q96JC9 268 aaPredicted RBP13.67□□□□□ -0.22
TSC2-219ENST00000563346 ZNF184Q99676 751 aaPredicted RBP13.67□□□□□ -0.22
TSC2-219ENST00000563346 CHCHD3Q9NX63 227 aaKnown RBP13.67□□□□□ -0.22
TSC2-219ENST00000563346 EXOSC1Q9Y3B2 195 aaKnown RBP13.67□□□□□ -0.22
TSC2-219ENST00000563346 SIRT4Q9Y6E7 314 aaPredicted RBP13.67□□□□□ -0.22
TSC2-219ENST00000563346 DNAH3Q8TD57 4116 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 IGHV3-43A0A0B4J1X8 118 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 C15orf65H3BRN8 121 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 AIPO00170 330 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 OGG1O15527 345 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 ORC5O43913 435 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 IGHV3-43DP0DP04 118 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 MYCNOSP40205 109 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 EGFEM1PQ0D2K5 195 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 MED21Q13503 144 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 EBI3Q14213 229 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 GPR176Q14439 515 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 VAX1Q5SQQ9 334 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 C18orf65Q6ZTR6 163 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 TGIF2LXQ8IUE1 241 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 IZUMO1Q8IYV9 350 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 LINC00311Q8N616 119 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 OR13C5Q8NGS8 318 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 GHSRQ92847 366 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 RDH12Q96NR8 316 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 SPACA1Q9HBV2 294 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 GFOD1Q9NXC2 390 aa13.66□□□□□ -0.22
TSC2-219ENST00000563346 DIMT1Q9UNQ2 313 aaKnown RBP13.66□□□□□ -0.22
TSC2-219ENST00000563346 A0A1W2PP11 408 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 MCRIP1C9JLW8 97 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 AP4M1O00189 453 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 MT-ND4P03905 459 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 VSIG8P0DPA2 414 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 TEX38Q6PEX7 206 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 ZNF695Q8IW36 515 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 C8orf31Q8N9H6 132 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 GON7Q9BXV9 100 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 RAB9BQ9NP90 201 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 LIN7CQ9NUP9 197 aaKnown RBP13.65□□□□□ -0.22
TSC2-219ENST00000563346 TRAPPC2LQ9UL33 140 aa13.65□□□□□ -0.22
TSC2-219ENST00000563346 COL7A1Q02388 2944 aa13.64□□□□□ -0.23
TSC2-219ENST00000563346 LINC01548A6NM66 108 aa13.64□□□□□ -0.23
TSC2-219ENST00000563346 SPINT2O43291 252 aa13.64□□□□□ -0.23
TSC2-219ENST00000563346 LALBAP00709 142 aa13.64□□□□□ -0.23
TSC2-219ENST00000563346 IGFBP3P17936 291 aaPredicted RBP13.64□□□□□ -0.23
TSC2-219ENST00000563346 GPR12P47775 334 aa13.64□□□□□ -0.23
TSC2-219ENST00000563346 RAB25P57735 213 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms