RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 H3BQ15 152 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 DEGS1O15121 323 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 TMEM50AO95807 157 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 IFNA5P01569 189 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 IGHV3-9P01782 118 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 ACP1P24666 158 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 EIF2S3P41091 472 aaKnown RBP11.18□□□□□ -0.62
USB1-207ENST00000563149 CLDN18P56856 261 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 ICAM4Q14773 271 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 H1FOOQ8IZA3 346 aaPredicted RBP11.18□□□□□ -0.62
USB1-207ENST00000563149 BATF2Q8N1L9 274 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 OR10J5Q8NHC4 309 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 LSM10Q969L4 123 aaKnown RBP11.18□□□□□ -0.62
USB1-207ENST00000563149 TVP23CQ96ET8 276 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 POM121L2Q96KW2 1035 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 HS3ST6Q96QI5 342 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 PRRG4Q9BZD6 226 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 ZNF703Q9H7S9 590 aaPredicted RBP11.18□□□□□ -0.62
USB1-207ENST00000563149 TAAR3PQ9P1P4 343 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 RNF150Q9ULK6 438 aa11.18□□□□□ -0.62
USB1-207ENST00000563149 ANKRD30BLA7E2S9 258 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 CD300LBA8K4G0 201 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 B4DEV8 164 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 TXNL1O43396 289 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 CST7O76096 145 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 HLA-HP01893 362 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 OR8U8P0C7N1 319 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 MDH2P40926 338 aaKnown RBP11.17□□□□□ -0.62
USB1-207ENST00000563149 GNG3P63215 75 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 ACSF3Q4G176 576 aaPredicted RBP11.17□□□□□ -0.62
USB1-207ENST00000563149 SLC35E3Q7Z769 313 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 ZNF429Q86V71 674 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 TUSC5Q8IXB3 177 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 CLDND2Q8NHS1 167 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 GPR146Q96CH1 333 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 TMPRSS5Q9H3S3 457 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 TREM2Q9NZC2 230 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 LIPGQ9Y5X9 500 aa11.17□□□□□ -0.62
USB1-207ENST00000563149 RTTNQ86VV8 2226 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 A0A096LPE4 126 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 A0A1B0GV50 99 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 A0A1W2PPZ6 126 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 MED19A0JLT2 244 aaPredicted RBP11.16□□□□□ -0.62
USB1-207ENST00000563149 PATE3B3GLJ2 98 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 SYNGR1O43759 233 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 CNOT4O95628 575 aaKnown RBP11.16□□□□□ -0.62
USB1-207ENST00000563149 SERPINE2P07093 398 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 ITGA3P26006 1051 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 TAGLN2P37802 199 aaKnown RBP11.16□□□□□ -0.62
USB1-207ENST00000563149 CD200P41217 278 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 UBE2KP61086 200 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 ZNF154Q13106 437 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 TGIF1Q15583 401 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 SLC23A3Q6PIS1 610 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 RBMS3Q6XE24 437 aaKnown RBP11.16□□□□□ -0.62
USB1-207ENST00000563149 MOB1BQ7L9L4 216 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 TIPARPQ7Z3E1 657 aaKnown RBP11.16□□□□□ -0.62
USB1-207ENST00000563149 FAM58AQ8N1B3 248 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 OR10V1Q8NGI7 309 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 APH1AQ96BI3 265 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 RAB39BQ96DA2 213 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 THOC3Q96J01 351 aaKnown RBP11.16□□□□□ -0.62
USB1-207ENST00000563149 NIPSNAP3BQ9BS92 247 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 OR51M1Q9H341 326 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 CALHM2Q9HA72 323 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 CRIM1Q9NZV1 1036 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 ABI3Q9P2A4 366 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 LOXL2Q9Y4K0 774 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 WSB1Q9Y6I7 421 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 KIAA1324LA8MWY0 1029 aaPredicted RBP11.16□□□□□ -0.62
USB1-207ENST00000563149 FABP1P07148 127 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 CBR1P16152 277 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 EPHA1P21709 976 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 APLNRP35414 380 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 HAGHQ16775 308 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 SPINK14Q6IE38 97 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 SLC16A13Q7RTY0 426 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 C5orf24Q7Z6I8 188 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 TMEM217Q8N7C4 229 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 ZNF552Q9H707 407 aaPredicted RBP11.16□□□□□ -0.62
USB1-207ENST00000563149 DLL3Q9NYJ7 618 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 IL36RNQ9UBH0 155 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 RFNGQ9Y644 331 aa11.16□□□□□ -0.62
USB1-207ENST00000563149 USP34Q70CQ2 3546 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 SDK1Q7Z5N4 2213 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 SHANK1Q9Y566 2161 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 TRAV24A0A0B4J272 114 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 LOC102723971A0A1B0GUV8 181 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.15□□□□□ -0.62
USB1-207ENST00000563149 NEURL1O76050 574 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 CCL2P13500 99 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 NQO2P16083 231 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 HOXA5P20719 270 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 S100PP25815 95 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 DLK1P80370 383 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 ABHD17BQ5VST6 288 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 C9orf135Q5VTT2 229 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 SCGB1C1Q8TD33 95 aa11.15□□□□□ -0.62
USB1-207ENST00000563149 PSMG3Q9BT73 122 aaPredicted RBP11.15□□□□□ -0.62
USB1-207ENST00000563149 DDA1Q9BW61 102 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms