RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 CA1P00915 261 aaPredicted RBP8.1□□□□□ -1.11
CDH1-205ENST00000562836 SMIM10L2AP0DMW4 78 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 SMIM10L2BP0DMW5 78 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 CTSEP14091 401 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 NMBRP28336 390 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 RBM11P57052 281 aaKnown RBP8.1□□□□□ -1.11
CDH1-205ENST00000562836 SPSB3Q6PJ21 355 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 OR4N5Q8IXE1 308 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 C10orf111Q8N326 155 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 Q8N976 141 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 OR2K2Q8NGT1 345 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 LINC00477Q96M19 166 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 GPR21Q99679 349 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 SPAG8Q99932 426 aaPredicted RBP8.1□□□□□ -1.11
CDH1-205ENST00000562836 ELOVL3Q9HB03 270 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 HES4Q9HCC6 221 aa8.1□□□□□ -1.11
CDH1-205ENST00000562836 DNPH1O43598 174 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 LINC00694P0DN24 101 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 CSRP1P21291 193 aaKnown RBP8.09□□□□□ -1.11
CDH1-205ENST00000562836 HIST1H1TP22492 207 aaPredicted RBP8.09□□□□□ -1.11
CDH1-205ENST00000562836 MANFP55145 182 aaKnown RBP8.09□□□□□ -1.11
CDH1-205ENST00000562836 TCTAP57738 103 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 CLRN1P58418 232 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 HLA-DRB3P79483 266 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 PAFAH1B3Q15102 231 aaKnown RBP8.09□□□□□ -1.11
CDH1-205ENST00000562836 PAQR9Q6ZVX9 377 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 C3orf56Q8N813 242 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 ZDHHC22Q8N966 263 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 PIGCQ92535 297 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 GLYATL1Q969I3 302 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 MCEEQ96PE7 176 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 TM2D2Q9BX73 214 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 WDR61Q9GZS3 305 aaKnown RBP8.09□□□□□ -1.11
CDH1-205ENST00000562836 COA1Q9GZY4 146 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 TP73-AS1Q9UF72 201 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 FBXL7Q9UJT9 491 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 RNF114Q9Y508 228 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 KCNE3Q9Y6H6 103 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 A0A1W2PRU2 124 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 H7C1C5 153 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 TNFRSF10CO14798 259 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 CELA3BP08861 270 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 ADMP35318 185 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 OR1D4P47884 311 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 PNRC1Q12796 327 aaPredicted RBP8.09□□□□□ -1.11
CDH1-205ENST00000562836 EIF3IQ13347 325 aaKnown RBP8.09□□□□□ -1.11
CDH1-205ENST00000562836 RNPS1Q15287 305 aaKnown RBP8.09□□□□□ -1.11
CDH1-205ENST00000562836 ZIC1Q15915 447 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 C3AR1Q16581 482 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 ACTL10Q5JWF8 245 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 ANKRD16Q6P6B7 361 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 TMEM178AQ8NBL3 297 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 CT55Q8WUE5 264 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 EMG1Q92979 244 aaKnown RBP8.09□□□□□ -1.11
CDH1-205ENST00000562836 AMELYQ99218 206 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 ATP5SQ99766 215 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 MOB1AQ9H8S9 216 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 KCNIP1Q9NZI2 227 aa8.09□□□□□ -1.11
CDH1-205ENST00000562836 DOCK3Q8IZD9 2030 aa8.09□□□□□ -1.12
CDH1-205ENST00000562836 A0A1W2PPI3 338 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 GATA2P23769 480 aaPredicted RBP8.08□□□□□ -1.12
CDH1-205ENST00000562836 RPS16P62249 146 aaKnown RBP8.08□□□□□ -1.12
CDH1-205ENST00000562836 GRB2P62993 217 aaKnown RBP8.08□□□□□ -1.12
CDH1-205ENST00000562836 ZXDAP98168 799 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 RELBQ01201 579 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 OR13C6PQ8NH95 151 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 NMNAT2Q9BZQ4 307 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 OR2D2Q9H210 308 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 ZAR1LA6NP61 321 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 VWC2LB2RUY7 222 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 CCKBRP32239 447 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 SNRPNP63162 240 aaKnown RBP8.08□□□□□ -1.12
CDH1-205ENST00000562836 RPEL1Q2QD12 228 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 ADAMTSL5Q6ZMM2 481 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 ZNF547Q8IVP9 402 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 CYB561D1Q8N8Q1 229 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 KREMEN2Q8NCW0 462 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 OR2G3Q8NGZ4 309 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 NEUROG1Q92886 237 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 IRF7Q92985 503 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 FAM103A1Q9BTL3 118 aaKnown RBP8.08□□□□□ -1.12
CDH1-205ENST00000562836 OR51I1Q9H343 314 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 MANBALQ9NQG1 85 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 TMEM242Q9NWH2 141 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 PIGLQ9Y2B2 252 aa8.08□□□□□ -1.12
CDH1-205ENST00000562836 TRBV20-1A0A075B6N2 111 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 LRP5LA4QPB2 252 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 TAL1P17542 331 aaPredicted RBP8.07□□□□□ -1.12
CDH1-205ENST00000562836 RPS4Y1P22090 263 aaKnown RBP8.07□□□□□ -1.12
CDH1-205ENST00000562836 PPP1CCP36873 323 aaKnown RBP8.07□□□□□ -1.12
CDH1-205ENST00000562836 EMP1P54849 157 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 FAM3BP58499 235 aaPredicted RBP8.07□□□□□ -1.12
CDH1-205ENST00000562836 PSG5Q15238 335 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 C3orf36Q3SXR2 165 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 MEIG1Q5JSS6 88 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 AGTRAPQ6RW13 159 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 CMTM4Q8IZR5 234 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 GPD1LQ8N335 351 aa8.07□□□□□ -1.12
CDH1-205ENST00000562836 OR51G1Q8NGK1 321 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms