RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 PRR25Q96S07 402 aa10.22□□□□□ -0.77
SF3B3-202ENST00000562722 S100A13Q99584 98 aa10.22□□□□□ -0.77
SF3B3-202ENST00000562722 RASL11BQ9BPW5 248 aa10.22□□□□□ -0.77
SF3B3-202ENST00000562722 DCLRE1BQ9H816 532 aa10.22□□□□□ -0.77
SF3B3-202ENST00000562722 LINC00574Q9H8X3 128 aa10.22□□□□□ -0.77
SF3B3-202ENST00000562722 LIN7CQ9NUP9 197 aaKnown RBP10.22□□□□□ -0.77
SF3B3-202ENST00000562722 TAS2R4Q9NYW5 299 aa10.22□□□□□ -0.77
SF3B3-202ENST00000562722 ING4Q9UNL4 249 aa10.22□□□□□ -0.77
SF3B3-202ENST00000562722 ST3GAL6Q9Y274 331 aa10.22□□□□□ -0.77
SF3B3-202ENST00000562722 U3KQK5 164 aa10.22□□□□□ -0.77
SF3B3-202ENST00000562722 TMEM30CPA0ZSE6 113 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 E9PI62 339 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 MPZL2O60487 215 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 CDRT1O95170 752 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 FADS2O95864 444 aaKnown RBP10.21□□□□□ -0.77
SF3B3-202ENST00000562722 CSTBP04080 98 aaKnown RBP10.21□□□□□ -0.77
SF3B3-202ENST00000562722 ALPLP05186 524 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 ECI1P42126 302 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 ZNF816Q0VGE8 651 aaPredicted RBP10.21□□□□□ -0.77
SF3B3-202ENST00000562722 ATAD3CQ5T2N8 411 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 C9orf66Q5T8R8 295 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 IZUMO1Q8IYV9 350 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 CCDC107Q8WV48 283 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 PYDC1Q8WXC3 89 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 ARL11Q969Q4 196 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 METTL9Q9H1A3 318 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 ABCG5Q9H222 651 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 AMBNQ9NP70 447 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 ERVK13-1Q9NX77 482 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 GMPPBQ9Y5P6 360 aa10.21□□□□□ -0.77
SF3B3-202ENST00000562722 IGHV3-43A0A0B4J1X8 118 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 SEC14L6B5MCN3 397 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 ATP5HO75947 161 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 MOSP00540 346 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 CD2P06729 351 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 IGHV3-43DP0DP04 118 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 GZMHP20718 246 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 SERPINA2P20848 420 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 VDAC1P21796 283 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 PPP3R1P63098 170 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 PAX5Q02548 391 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 FOXE3Q13461 319 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 EBI3Q14213 229 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 OR52N1Q8NH53 320 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 Q96MT0 163 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 JAM3Q9BX67 310 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF581Q9P0T4 197 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 COL7A1Q02388 2944 aa10.2□□□□□ -0.78
SF3B3-202ENST00000562722 GEMIN2O14893 280 aaKnown RBP10.19□□□□□ -0.78
SF3B3-202ENST00000562722 LY86O95711 162 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 ELANEP08246 267 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF93P35789 620 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-202ENST00000562722 ALDH3A2P51648 485 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 GTF2A1P52655 376 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-202ENST00000562722 RBM11P57052 281 aaKnown RBP10.19□□□□□ -0.78
SF3B3-202ENST00000562722 KIR2DS1Q14954 304 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 DDI2Q5TDH0 399 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 STX19Q8N4C7 294 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 Q8N6K4 173 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 Q8N9W7 124 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 GPR148Q8TDV2 347 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 RTN4IP1Q8WWV3 396 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-202ENST00000562722 S1PR3Q99500 378 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 ASCL2Q99929 193 aa10.19□□□□□ -0.78
SF3B3-202ENST00000562722 PAK1IP1Q9NWT1 392 aaPredicted RBP10.19□□□□□ -0.78
SF3B3-202ENST00000562722 C15orf65H3BRN8 121 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 AIPO00170 330 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 CD1BP29016 333 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 SOX6P35712 828 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 CDX1P47902 265 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-202ENST00000562722 RAB40BQ12829 278 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF260Q3ZCT1 412 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 FAM53AQ6NSI3 398 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF529Q6P280 563 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 ASCL4Q6XD76 172 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 LINC00596Q86U02 117 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 PRR18Q8N4B5 295 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 CBR4Q8N4T8 237 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 LINC00311Q8N616 119 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 Q8NFD4 153 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 OR52M1Q8NGK5 317 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 OR52I1Q8NGK6 324 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 RGP1Q92546 391 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-202ENST00000562722 TMEM106AQ96A25 262 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 TMEM138Q9NPI0 162 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 GFOD1Q9NXC2 390 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 GNG12Q9UBI6 72 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 SIRT4Q9Y6E7 314 aaPredicted RBP10.18□□□□□ -0.78
SF3B3-202ENST00000562722 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
SF3B3-202ENST00000562722 ZNF736B4DX44 427 aaPredicted RBP10.17□□□□□ -0.78
SF3B3-202ENST00000562722 SPINT2O43291 252 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 TXNL1O43396 289 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 ORC5O43913 435 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 BDKRB2P30411 391 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 MPV17LQ2QL34 196 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 SLC22A6Q4U2R8 563 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 KLHL22Q53GT1 634 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 NHLRC3Q5JS37 347 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 C8orf31Q8N9H6 132 aa10.17□□□□□ -0.78
SF3B3-202ENST00000562722 OR8H1Q8NGG4 311 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms