RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 SSR3Q9UNL2 185 aa4.3□□□□□ -1.72
TCF4-213ENST00000562543 HILPDAQ9Y5L2 63 aa4.3□□□□□ -1.72
TCF4-213ENST00000562543 DNAH8Q96JB1 4490 aa4.3□□□□□ -1.72
TCF4-213ENST00000562543 NACAE9PAV3 2078 aa4.3□□□□□ -1.72
TCF4-213ENST00000562543 IGHV4-4A0A075B6R2 117 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 A0A0B4J293 547 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 A0A0G2JPF8 293 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 LOC100506127A0A0U1RQW1 187 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 IQCF6A8MYZ5 107 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 TMEM233B4DJY2 109 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 HNRNPCL3B7ZW38 293 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 H0Y980 276 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 TEX46H3BTG2 121 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 SLC28A1O00337 649 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 FABP7O15540 132 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 AKR7A2O43488 359 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 TGOLN2O43493 480 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 PRAF2O60831 178 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 RGS11O94810 467 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 IGHG2P01859 326 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 HNRNPCL4P0DMR1 293 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 SLC2A2P11168 524 aaPredicted RBP4.29□□□□□ -1.72
TCF4-213ENST00000562543 ZNF823P16415 610 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 SPI1P17947 270 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 FPR3P25089 353 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 PSMA1P25786 263 aaKnown RBP4.29□□□□□ -1.72
TCF4-213ENST00000562543 FRKP42685 505 aaPredicted RBP4.29□□□□□ -1.72
TCF4-213ENST00000562543 GPR12P47775 334 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 AKR1D1P51857 326 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 MFAP2P55001 183 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 OR12D2P58182 307 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 CD81P60033 236 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 CTXN1P60606 82 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 CFHR3Q02985 330 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 PUDPQ08623 228 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 SNAPC1Q16533 368 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 MICBQ29980 383 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 MS4A18Q3C1V0 323 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 RNF212Q495C1 297 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 SPIN4Q56A73 249 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 PYDC2Q56P42 97 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 NHLRC3Q5JS37 347 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 MORN5Q5VZ52 161 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 OR2T5Q6IEZ7 315 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 PYHIN1Q6K0P9 492 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 MZT2AQ6P582 158 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 FAHD1Q6P587 224 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 C5orf46Q6UWT4 87 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 RASSF6Q6ZTQ3 369 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 OR2T4Q8NH00 348 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 OR2T29Q8NH02 315 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 RNASE11Q8TAA1 199 aaKnown RBP4.29□□□□□ -1.72
TCF4-213ENST00000562543 RHEBL1Q8TAI7 183 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 STAG3L4Q8TBR4 150 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 ACOT12Q8WYK0 555 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 SLC25A46Q96AG3 418 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 APIPQ96GX9 242 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 PYURFQ96I23 114 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 ZNF582Q96NG8 517 aaPredicted RBP4.29□□□□□ -1.72
TCF4-213ENST00000562543 EPYCQ99645 322 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 SEC22CQ9BRL7 303 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 CHCHD6Q9BRQ6 235 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 OR51J1Q9H342 316 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 OPA3Q9H6K4 179 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 ZCCHC3Q9NUD5 404 aaKnown RBP4.29□□□□□ -1.72
TCF4-213ENST00000562543 ZNF580Q9UK33 172 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 STARD10Q9Y365 291 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 MOB4Q9Y3A3 225 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 SAMHD1Q9Y3Z3 626 aaKnown RBP4.29□□□□□ -1.72
TCF4-213ENST00000562543 NUBP2Q9Y5Y2 271 aa4.29□□□□□ -1.72
TCF4-213ENST00000562543 MEIKINA0A087WXM9 373 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 A0A096LPI6 279 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 TRAPPC13A5PLN9 417 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 ARRDC5A6NEK1 342 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 ZNF726A6NNF4 738 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.28□□□□□ -1.72
TCF4-213ENST00000562543 DNASE2O00115 360 aaPredicted RBP4.28□□□□□ -1.72
TCF4-213ENST00000562543 CXCR6O00574 342 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 SELENOFO60613 162 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 WBP4O75554 376 aaKnown RBP4.28□□□□□ -1.72
TCF4-213ENST00000562543 STX11O75558 287 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 OR4F21O95013 312 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 CCNB2O95067 398 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 CD1AP06126 327 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 ANXA4P09525 319 aaPredicted RBP4.28□□□□□ -1.72
TCF4-213ENST00000562543 ANXA8P13928 327 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 HSD3B1P14060 373 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 MUC1P15941 1255 aaPredicted RBP4.28□□□□□ -1.72
TCF4-213ENST00000562543 NCK1P16333 377 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 RAB4AP20338 218 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 RPS4Y1P22090 263 aaKnown RBP4.28□□□□□ -1.72
TCF4-213ENST00000562543 GALP22466 123 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 PSMB8P28062 276 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 GRPRP30550 384 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 CAV3P56539 151 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 EGR4Q05215 589 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 MLLT11Q13015 90 aaPredicted RBP4.28□□□□□ -1.72
TCF4-213ENST00000562543 KIAA0141Q14154 515 aaPredicted RBP4.28□□□□□ -1.72
TCF4-213ENST00000562543 PCK2Q16822 640 aa4.28□□□□□ -1.72
TCF4-213ENST00000562543 C4orf46Q504U0 113 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms